RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 APPBP2Q92624 585 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CMA1P23946 247 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 CDC27P30260 824 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 IARSP41252 1262 aaKnown RBP14.28□□□□□ -0.12
CHMP3-201ENST00000263856 LONRF3Q496Y0 759 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
CHMP3-201ENST00000263856 FOXP2O15409 715 aa14.27□□□□□ -0.12
CHMP3-201ENST00000263856 ETF1P62495 437 aaKnown RBP14.27□□□□□ -0.12
CHMP3-201ENST00000263856 TBC1D10CQ8IV04 446 aa14.27□□□□□ -0.12
CHMP3-201ENST00000263856 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.13
CHMP3-201ENST00000263856 BMS1Q14692 1282 aaKnown RBP14.27□□□□□ -0.13
CHMP3-201ENST00000263856 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.13
CHMP3-201ENST00000263856 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 TMEM67Q5HYA8 995 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 JMYQ8N9B5 988 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-201ENST00000263856 ANGEL1Q9UNK9 670 aaKnown RBP14.26□□□□□ -0.13
CHMP3-201ENST00000263856 ZBTB43O43298 467 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 ATF3P18847 181 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 CCDC102BQ68D86 513 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 MYH15Q9Y2K3 1946 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 MRC1P22897 1456 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-201ENST00000263856 SNAP23O00161 211 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 EVCP57679 992 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHMP3-201ENST00000263856 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
CHMP3-201ENST00000263856 OVOS2A0A0G2JMS6 1433 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 IFIT3O14879 490 aaKnown RBP14.25□□□□□ -0.13
CHMP3-201ENST00000263856 MCAMP43121 646 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 PDE4BQ07343 736 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 NEDD4P46934 1319 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 COBLO75128 1261 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 STX17P56962 302 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 GRIN1Q05586 938 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
CHMP3-201ENST00000263856 BTBD18B2RXH4 712 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 CASQ1P31415 396 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 APOA5Q6Q788 366 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 LZTFL1Q9NQ48 299 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
CHMP3-201ENST00000263856 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
CHMP3-201ENST00000263856 CDKL5O76039 1030 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 AFMP43652 599 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 BAG1Q99933 345 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-201ENST00000263856 PPP2R2CQ9Y2T4 447 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 ZMYM6O95789 1325 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 CCDC66A2RUB6 948 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 TOGARAM2Q6ZUX3 1019 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-201ENST00000263856 NEK11Q8NG66 645 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 IRX2Q9BZI1 471 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-201ENST00000263856 SERTAD1Q9UHV2 236 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 WWC3Q9ULE0 1092 aa14.23□□□□□ -0.13
CHMP3-201ENST00000263856 CASP1P29466 404 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 SSRP1Q08945 709 aaKnown RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 CCDC12Q8WUD4 166 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 WDR24Q96S15 920 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 BPIFA3Q9BQP9 254 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 NAPBQ9H115 298 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 HSD3B7Q9H2F3 369 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 GREM2Q9H772 168 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 L2HGDHQ9H9P8 463 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 PRDM11Q9NQV5 511 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 CCP110O43303 1012 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 ZSCAN12O43309 604 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 ITGA6P23229 1130 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 GYS2P54840 703 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 IQSEC3Q9UPP2 1182 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 FANCGO15287 622 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 PHKA1P46020 1223 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms