RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CAVIN4Q5BKX8 364 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 URB1O60287 2271 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 CLUL1Q15846 466 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 CACYBPQ9HB71 228 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 VSIG1Q86XK7 387 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 MTRF1LQ9UGC7 380 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 FAF1Q9UNN5 650 aaPredicted RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 PDZD8Q8NEN9 1154 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 ATP5J2-PTCD1G3V325 749 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 SMAP1Q8IYB5 467 aaPredicted RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 TAF12Q16514 161 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 CCDC117Q8IWD4 279 aaPredicted RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 CLCN1P35523 988 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 IL1RL1Q01638 556 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 TEX11Q8IYF3 940 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 ITSN2Q9NZM3 1697 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 ASXL2Q76L83 1435 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
PKD1-201ENST00000262304 UVSSAQ2YD98 709 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 RILPQ96NA2 401 aa11.42□□□□□ -0.58
PKD1-201ENST00000262304 MFSD6Q6ZSS7 791 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 INTUQ9ULD6 942 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 ZKSCAN5Q9Y2L8 839 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 EXOC5O00471 708 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 IFIT5Q13325 482 aaKnown RBP11.41□□□□□ -0.58
PKD1-201ENST00000262304 TTLL3Q9Y4R7 772 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 CLTAP09496 248 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 I3L4J1 428 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 MAN1A1P33908 653 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.58
PKD1-201ENST00000262304 SLC4A7Q9Y6M7 1214 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.41□□□□□ -0.58
PKD1-201ENST00000262304 hCG_2014768A0A024R1R8 64 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
PKD1-201ENST00000262304 MAP3K12Q12852 859 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 CARD6Q9BX69 1037 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 SPOPO43791 374 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 PPP4R4Q6NUP7 873 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 TAB3Q8N5C8 712 aaPredicted RBP11.41□□□□□ -0.58
PKD1-201ENST00000262304 BIRC2Q13490 618 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 CAPN12Q6ZSI9 719 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 E2F5Q15329 346 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 SMARCC2Q8TAQ2 1214 aa11.41□□□□□ -0.58
PKD1-201ENST00000262304 WDR46O15213 610 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 STMN1P16949 149 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 ERMNQ8TAM6 284 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 MYCBPQ99417 103 aaPredicted RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 DHX29Q7Z478 1369 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 GOLGA6BA6NDN3 693 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 RXRAP19793 462 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 C14orf93Q9H972 538 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 MGEA5O60502 916 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 ALDH1L2Q3SY69 923 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 PHLDB2Q86SQ0 1253 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 BZW2Q9Y6E2 419 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 NINQ8N4C6 2090 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 Q6ZUG5 572 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 TBC1D7Q9P0N9 293 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
PKD1-201ENST00000262304 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
PKD1-201ENST00000262304 MSH6P52701 1360 aa11.4□□□□□ -0.59
PKD1-201ENST00000262304 CASP2P42575 452 aa11.4□□□□□ -0.59
PKD1-201ENST00000262304 BEND3Q5T5X7 828 aa11.4□□□□□ -0.59
PKD1-201ENST00000262304 INPP1P49441 399 aa11.4□□□□□ -0.59
PKD1-201ENST00000262304 RTN1Q16799 776 aa11.4□□□□□ -0.59
PKD1-201ENST00000262304 IGHDP01880 384 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
PKD1-201ENST00000262304 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 TBC1D8O95759 1140 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 KLHL40Q2TBA0 621 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 NAPGQ99747 312 aaPredicted RBP11.39□□□□□ -0.59
PKD1-201ENST00000262304 RAD51AP2Q09MP3 1159 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 KRT86O43790 486 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 ANXA1P04083 346 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 CPA1P15085 419 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 PPP2R5AQ15172 486 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 ADAT2Q7Z6V5 191 aaKnown RBP11.39□□□□□ -0.59
PKD1-201ENST00000262304 NSD2O96028 1365 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 SAT1P21673 171 aa11.39□□□□□ -0.59
PKD1-201ENST00000262304 INF2Q27J81 1249 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms