RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 KIAA1211Q6ZU35 1233 aa32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 SDR42E1Q8WUS8 393 aa32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 REC8O95072 547 aa32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 USP17L8P0C7I0 530 aa32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 HSPD1P10809 573 aaKnown RBP32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 USP26Q9BXU7 913 aa32.92■■■□□ 2.86
SMARCD3-201ENST00000262188 GPR75-ASB3A0A0A6YYF3 556 aa32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 CFAP100Q494V2 611 aa32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 FAM163AQ96GL9 167 aaPredicted RBP32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 SLC4A4Q9Y6R1 1079 aa32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 EGFRP00533 1210 aa32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 APOBEC3HQ6NTF7 200 aaKnown RBP32.9■■■□□ 2.86
SMARCD3-201ENST00000262188 HHIPL2Q6UWX4 724 aa32.89■■■□□ 2.86
SMARCD3-201ENST00000262188 SLF2Q8IX21 1173 aa32.89■■■□□ 2.86
SMARCD3-201ENST00000262188 APPP05067 770 aa32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 MICALL2Q8IY33 904 aa32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 GPC2Q8N158 579 aa32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 OGFOD1Q8N543 542 aa32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 EPB41L4AQ9HCS5 686 aaPredicted RBP32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 SERPINA10Q9UK55 444 aa32.88■■■□□ 2.85
SMARCD3-201ENST00000262188 RHBDL3P58872 404 aa32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 RBM26Q5T8P6 1007 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 PRMT6Q96LA8 375 aaPredicted RBP32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 ZDHHC15Q96MV8 337 aa32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 NOL10Q9BSC4 688 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 CNOT7Q9UIV1 285 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 RBM8AQ9Y5S9 174 aaKnown RBP32.87■■■□□ 2.85
SMARCD3-201ENST00000262188 GSG1L2A8MUP6 293 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 BAG3O95817 575 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 CACNB3P54284 484 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 PPP4CP60510 307 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 MAP4K1Q92918 833 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 HDAC9Q9UKV0 1011 aa32.86■■■□□ 2.85
SMARCD3-201ENST00000262188 SAMD7Q7Z3H4 446 aa32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 IGSF3O75054 1194 aa32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 RPS12P25398 132 aaKnown RBP32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 HDLBPQ00341 1268 aaKnown RBP32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 CDC42EP5Q6NZY7 148 aa32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 USP40Q9NVE5 1235 aa32.85■■■□□ 2.85
SMARCD3-201ENST00000262188 TDRD3Q9H7E2 651 aaKnown RBP32.84■■■□□ 2.85
SMARCD3-201ENST00000262188 GSE1Q14687 1217 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 SLC4A8Q2Y0W8 1093 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 TMED8Q6PL24 325 aaPredicted RBP32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 TEX11Q8IYF3 940 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 TGFBRAP1Q8WUH2 860 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 MRIQ9BWK5 157 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 MYOZ2Q9NPC6 264 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 PALD1Q9ULE6 856 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 TAF6LQ9Y6J9 622 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 TBC1D10BQ4KMP7 808 aaPredicted RBP32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 DPF2Q92785 391 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 DSCC1Q9BVC3 393 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 C22orf23Q9BZE7 217 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 ZMYND15Q9H091 742 aa32.83■■■□□ 2.85
SMARCD3-201ENST00000262188 PATL2C9JE40 543 aaKnown RBP32.82■■■□□ 2.84
SMARCD3-201ENST00000262188 FGAP02671 866 aa32.82■■■□□ 2.84
SMARCD3-201ENST00000262188 EPS15P42566 896 aa32.82■■■□□ 2.84
SMARCD3-201ENST00000262188 DLGAP5Q15398 846 aa32.82■■■□□ 2.84
SMARCD3-201ENST00000262188 CRNKL1Q9BZJ0 848 aaKnown RBP32.82■■■□□ 2.84
SMARCD3-201ENST00000262188 SPDYE2BA6NHP3 402 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 SMIM22K7EJ46 135 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 SPDYE6P0CI01 402 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 EVX2Q03828 476 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 NBPF9Q3BBW0 867 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 MAPKAPK5Q8IW41 473 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 IFNL3Q8IZI9 196 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 UPF2Q9HAU5 1272 aaKnown RBP32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 CLRN2A0PK11 232 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 ZNF280AP59817 542 aaPredicted RBP32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 GPRC5DQ9NZD1 345 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 CDK5RAP2Q96SN8 1893 aa32.81■■■□□ 2.84
SMARCD3-201ENST00000262188 PICALMQ13492 652 aa32.8■■■□□ 2.84
SMARCD3-201ENST00000262188 BAZ2AQ9UIF9 1905 aaKnown RBP32.8■■■□□ 2.84
SMARCD3-201ENST00000262188 USP5P45974 858 aa32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 NFIAQ12857 509 aa32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 DDX4Q9NQI0 724 aaKnown RBP32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 SCAF8Q9UPN6 1271 aaKnown RBP32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 CYP2D7A0A087X1C5 515 aa32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 HAND2P61296 217 aa32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 ASTN2O75129 1339 aaPredicted RBP32.79■■■□□ 2.84
SMARCD3-201ENST00000262188 WDHD1O75717 1129 aaPredicted RBP32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 GNAT2P19087 354 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 NECTIN1Q15223 517 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 TRPM4Q8TD43 1214 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 TBC1D32Q96NH3 1257 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 DCP1AQ9NPI6 582 aaPredicted RBP32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 WNT10BO00744 389 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 TDO2P48775 406 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 RASEFQ8IZ41 740 aa32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 SAP30BPQ9UHR5 308 aaKnown RBP32.78■■■□□ 2.84
SMARCD3-201ENST00000262188 DPY19L2Q6NUT2 758 aa32.77■■■□□ 2.84
SMARCD3-201ENST00000262188 U3KPZ7 1027 aaPredicted RBP32.77■■■□□ 2.84
SMARCD3-201ENST00000262188 DCAF8L1A6NGE4 600 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 HSPA4P34932 840 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 CREB3L3Q68CJ9 461 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 STK11IPQ8N1F8 1099 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 ZBED3Q96IU2 234 aaPredicted RBP32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 NAPBQ9H115 298 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 BRPF3Q9ULD4 1205 aa32.76■■■□□ 2.84
SMARCD3-201ENST00000262188 SLC27A2O14975 620 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms