RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
SGCA-201ENST00000262018 SNAPC2Q13487 334 aa16.58■□□□□ 0.24
SGCA-201ENST00000262018 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
SGCA-201ENST00000262018 MTMR10Q9NXD2 777 aa16.58■□□□□ 0.24
SGCA-201ENST00000262018 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
SGCA-201ENST00000262018 ITGA6P23229 1130 aa16.57■□□□□ 0.24
SGCA-201ENST00000262018 CHRNDQ07001 517 aa16.57■□□□□ 0.24
SGCA-201ENST00000262018 ERO1BQ86YB8 467 aa16.57■□□□□ 0.24
SGCA-201ENST00000262018 IRF6O14896 467 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
SGCA-201ENST00000262018 ZNF804AQ7Z570 1209 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
SGCA-201ENST00000262018 GDF15Q99988 308 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 API5Q9BZZ5 524 aaKnown RBP16.56■□□□□ 0.24
SGCA-201ENST00000262018 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 SNCAIPQ9Y6H5 919 aa16.56■□□□□ 0.24
SGCA-201ENST00000262018 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 TAF5LO75529 589 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 IL1R1P14778 569 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 BMP8BP34820 402 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 TNNI2P48788 182 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 PRKCZQ05513 592 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 MYH3P11055 1940 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
SGCA-201ENST00000262018 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
SGCA-201ENST00000262018 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
SGCA-201ENST00000262018 SLAIN1Q8ND83 568 aa16.54■□□□□ 0.24
SGCA-201ENST00000262018 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
SGCA-201ENST00000262018 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
SGCA-201ENST00000262018 BCAMP50895 628 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 PPIL2Q13356 520 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 C15orf52Q6ZUT6 534 aaKnown RBP16.53■□□□□ 0.24
SGCA-201ENST00000262018 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
SGCA-201ENST00000262018 PTPRCP08575 1304 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 PDHXO00330 501 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
SGCA-201ENST00000262018 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 C7orf61Q8IZ16 206 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
SGCA-201ENST00000262018 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 SERPINA10Q9UK55 444 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 GABRQQ9UN88 632 aa16.53■□□□□ 0.24
SGCA-201ENST00000262018 ADCY3O60266 1144 aa16.52■□□□□ 0.23
SGCA-201ENST00000262018 FCGRTP55899 365 aa16.52■□□□□ 0.23
SGCA-201ENST00000262018 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.23
SGCA-201ENST00000262018 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.23
SGCA-201ENST00000262018 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 H7C1W4 665 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 FLIIQ13045 1269 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 MFSD14BQ5SR56 506 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
SGCA-201ENST00000262018 NEURL1BA8MQ27 555 aa16.5■□□□□ 0.23
SGCA-201ENST00000262018 INHAP05111 366 aa16.5■□□□□ 0.23
SGCA-201ENST00000262018 ELNP15502 786 aa16.5■□□□□ 0.23
SGCA-201ENST00000262018 NECAB2Q7Z6G3 386 aa16.5■□□□□ 0.23
SGCA-201ENST00000262018 TDHQ8IZJ6 230 aa16.5■□□□□ 0.23
SGCA-201ENST00000262018 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
SGCA-201ENST00000262018 ARAP2Q8WZ64 1704 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 SYN1P17600 705 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 CAPN2P17655 700 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 CRKP46108 304 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 CACNB3P54284 484 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 PPATQ06203 517 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 G2E3Q7L622 706 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
SGCA-201ENST00000262018 PLA2G12BQ9BX93 195 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 PCDHB15Q9Y5E8 787 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
SGCA-201ENST00000262018 CSF1RP07333 972 aa16.48■□□□□ 0.23
SGCA-201ENST00000262018 MAGEA10P43363 369 aaPredicted RBP16.48■□□□□ 0.23
SGCA-201ENST00000262018 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
SGCA-201ENST00000262018 PRDM6Q9NQX0 595 aa16.48■□□□□ 0.23
SGCA-201ENST00000262018 ALPK3Q96L96 1907 aa16.48■□□□□ 0.23
SGCA-201ENST00000262018 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
SGCA-201ENST00000262018 IGHDP01880 384 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 BCRP11274 1271 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 FLT3LGP49771 235 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
SGCA-201ENST00000262018 CRISPLD2Q9H0B8 497 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
SGCA-201ENST00000262018 HOOK2Q96ED9 719 aa16.46■□□□□ 0.23
SGCA-201ENST00000262018 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
SGCA-201ENST00000262018 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
SGCA-201ENST00000262018 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
SGCA-201ENST00000262018 CYP2C8P10632 490 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 INPP5BP32019 993 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
SGCA-201ENST00000262018 GCKRQ14397 625 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms