RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CCDC129Q6ZRS4 1044 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 MRPS27Q92552 414 aaKnown RBP15.86■□□□□ 0.13
CDH1-201ENST00000261769 TRIM47Q96LD4 638 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 PNMA2Q9UL42 364 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 YEATS4O95619 227 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 FERMT2Q96AC1 680 aa15.86■□□□□ 0.13
CDH1-201ENST00000261769 CIAO1O76071 339 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 RRAGBQ5VZM2 374 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 RTKN2Q8IZC4 609 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 PATL2C9JE40 543 aaKnown RBP15.85■□□□□ 0.13
CDH1-201ENST00000261769 ASIC1P78348 528 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 TDRD12Q587J7 1177 aaKnown RBP15.85■□□□□ 0.13
CDH1-201ENST00000261769 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 RNF123Q5XPI4 1314 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 CYP27B1O15528 508 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 USP8P40818 1118 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 FCHSD1Q86WN1 690 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 BIN1O00499 593 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 PHACTR2O75167 634 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 KCNQ4P56696 695 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
CDH1-201ENST00000261769 PSMA7O14818 248 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 SGSM2O43147 1006 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 FAM13AO94988 1023 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 GDPD2Q9HCC8 539 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 GPR108Q9NPR9 543 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 SPTLC2O15270 562 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 BCAMP50895 628 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 TFAP4Q01664 338 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 SPAG1Q07617 926 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 OTUD7BQ6GQQ9 843 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 SNX21Q969T3 373 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 IMPG2Q9BZV3 1241 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 KIF22Q14807 665 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 DSCC1Q9BVC3 393 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 AGLP35573 1532 aa15.84■□□□□ 0.13
CDH1-201ENST00000261769 USO1O60763 962 aaKnown RBP15.83■□□□□ 0.13
CDH1-201ENST00000261769 RXRAP19793 462 aa15.83■□□□□ 0.13
CDH1-201ENST00000261769 RPS6KB1P23443 525 aa15.83■□□□□ 0.13
CDH1-201ENST00000261769 ARHGEF6Q15052 776 aa15.83■□□□□ 0.13
CDH1-201ENST00000261769 ERFEQ4G0M1 354 aa15.83■□□□□ 0.13
CDH1-201ENST00000261769 CPXCR1Q8N123 301 aa15.83■□□□□ 0.13
CDH1-201ENST00000261769 SLC27A2O14975 620 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 NUP88Q99567 741 aaPredicted RBP15.83■□□□□ 0.12
CDH1-201ENST00000261769 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 MAP3K9P80192 1104 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 INTS4Q96HW7 963 aaKnown RBP15.83■□□□□ 0.12
CDH1-201ENST00000261769 FAM227BQ96M60 508 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 ANKRD62A6NC57 917 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 ZSCAN12O43309 604 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 KIF4AO95239 1232 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 SP4Q02446 784 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 AKNAD1Q5T1N1 836 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 NSMFQ6X4W1 530 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 USP26Q9BXU7 913 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
CDH1-201ENST00000261769 USP17L12C9JPN9 530 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 USP17L21D6R901 530 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 HSPA1LP34931 641 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 AFMP43652 599 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 SUPT20HL1Q3ZLR7 823 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 ATL3Q6DD88 541 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 FAM177A1Q8N128 213 aaPredicted RBP15.82■□□□□ 0.12
CDH1-201ENST00000261769 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 PDE6AP16499 860 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 SCNN1DP51172 638 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 RILPL1Q5EBL4 403 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 OTUD7AQ8TE49 926 aaPredicted RBP15.82■□□□□ 0.12
CDH1-201ENST00000261769 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 TULP4Q9NRJ4 1543 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
CDH1-201ENST00000261769 MCM7P33993 719 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 VPS72Q15906 364 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 STK24Q9Y6E0 443 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 F13A1P00488 732 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 LRRC24Q50LG9 513 aa15.82■□□□□ 0.12
CDH1-201ENST00000261769 LMTK2Q8IWU2 1503 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 MARCKSP29966 332 aaPredicted RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 LETM2Q2VYF4 491 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 LLPHQ9BRT6 129 aaKnown RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 V9GY48 417 aaPredicted RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 CRB1P82279 1406 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 BTDP43251 543 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 ENOX2Q16206 610 aaKnown RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 GRIPAP1Q4V328 841 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 EAF2Q96CJ1 260 aaPredicted RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
CDH1-201ENST00000261769 CLTCL1P53675 1640 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 ZNF165P49910 485 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
CDH1-201ENST00000261769 AXIN2Q9Y2T1 843 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms