RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 MIER3Q7Z3K6 550 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 IL1RAPL2Q9NP60 686 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 KLC4Q9NSK0 619 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 EIF4E1BA6NMX2 242 aaKnown RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 HIP1O00291 1037 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 BRD1O95696 1058 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 GNAI2P04899 355 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 LAMB3Q13751 1172 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 PACS2Q86VP3 889 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 TRIM58Q8NG06 486 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 THOC1Q96FV9 657 aaKnown RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 BATF3Q9NR55 127 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 RABGAP1Q9Y3P9 1069 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 ABCC11Q96J66 1382 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 DDX12PQ92771 950 aa12□□□□□ -0.49
KPNA3-201ENST00000261667 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
KPNA3-201ENST00000261667 GOLGA8KD6RF30 607 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 SESN3P58005 492 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 HAUS1Q96CS2 278 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 N4BP3O15049 544 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 TACC1O75410 805 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 VSIG1Q86XK7 387 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 PPP1R13BQ96KQ4 1090 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 ACTR5Q9H9F9 607 aaPredicted RBP11.99□□□□□ -0.49
KPNA3-201ENST00000261667 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 TNNQ9UQP3 1299 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 AP1G2O75843 785 aa11.99□□□□□ -0.49
KPNA3-201ENST00000261667 TPP2P29144 1249 aaPredicted RBP11.99□□□□□ -0.49
KPNA3-201ENST00000261667 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
KPNA3-201ENST00000261667 TTC14Q96N46 770 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 ZNF711Q9Y462 761 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 KRT86O43790 486 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 OPHN1O60890 802 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 VPS41P49754 854 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 CASP8Q14790 479 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 MRPS27Q92552 414 aaKnown RBP11.98□□□□□ -0.49
KPNA3-201ENST00000261667 ARHGEF2Q92974 986 aaKnown RBP11.98□□□□□ -0.49
KPNA3-201ENST00000261667 NSD3Q9BZ95 1437 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
KPNA3-201ENST00000261667 NLRP5P59047 1200 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 USP6NLQ92738 828 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 CLSTN2Q9H4D0 955 aa11.98□□□□□ -0.49
KPNA3-201ENST00000261667 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 KCTD16Q68DU8 428 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.497e-6■■■■□ 19.6
KPNA3-201ENST00000261667 UBAC1Q9BSL1 405 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 ABCD1P33897 745 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 PRPHP41219 470 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 NOP2P46087 812 aaKnown RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 SCRN1Q12765 414 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 NSFL1CQ9UNZ2 370 aaKnown RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 POLR3AO14802 1390 aaPredicted RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
KPNA3-201ENST00000261667 DTNBP1Q96EV8 351 aa11.97□□□□□ -0.49
KPNA3-201ENST00000261667 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
KPNA3-201ENST00000261667 UBLCP1Q8WVY7 318 aaPredicted RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 AATFQ9NY61 560 aaKnown RBP eCLIP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 ABCF2Q9UG63 623 aa11.96□□□□□ -0.49
KPNA3-201ENST00000261667 DLC1Q96QB1 1528 aa11.96□□□□□ -0.49
KPNA3-201ENST00000261667 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 FANCCQ00597 558 aa11.96□□□□□ -0.49
KPNA3-201ENST00000261667 TDRD12Q587J7 1177 aaKnown RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
KPNA3-201ENST00000261667 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.49
KPNA3-201ENST00000261667 TXNDC9O14530 226 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.5
KPNA3-201ENST00000261667 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 KIAA0825Q8IV33 1275 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 KIRREL3Q8IZU9 778 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 KRT32Q14532 448 aa11.96□□□□□ -0.5
KPNA3-201ENST00000261667 SUGP1Q8IWZ8 645 aaKnown RBP11.96□□□□□ -0.5
KPNA3-201ENST00000261667 USP19O94966 1318 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 AKR1B10O60218 316 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 MMP14P50281 582 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 GRAMD4Q6IC98 578 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 RUFY4Q6ZNE9 571 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 SYCP3Q8IZU3 236 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
KPNA3-201ENST00000261667 B4GALNT2Q8NHY0 566 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 CD248Q9HCU0 757 aa11.95□□□□□ -0.5
KPNA3-201ENST00000261667 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms