RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 TRIM66O15016 1216 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 MBD4O95243 580 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 PTPN12Q05209 780 aaKnown RBP11.53□□□□□ -0.56
PALB2-201ENST00000261584 NACAP1Q9BZK3 213 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 GLI2P10070 1586 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 IDEP14735 1019 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 USP5P45974 858 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 NLRP5P59047 1200 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 IQCB1Q15051 598 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 TOGARAM2Q6ZUX3 1019 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 CTNND2Q9UQB3 1225 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 SLC4A4Q9Y6R1 1079 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 CEP152O94986 1710 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 TNRQ92752 1358 aa11.53□□□□□ -0.56
PALB2-201ENST00000261584 CTAGE15A4D2H0 777 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 CTAGE8P0CG41 777 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.56
PALB2-201ENST00000261584 CTAGE6Q86UF2 777 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 CTAGE4Q8IX94 777 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 WDR24Q96S15 920 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 MAST3O60307 1309 aa11.52□□□□□ -0.56
PALB2-201ENST00000261584 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 WTAPQ15007 396 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 RTN1Q16799 776 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
PALB2-201ENST00000261584 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 KIF1BO60333 1816 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.57
PALB2-201ENST00000261584 CCZ1BP86790 482 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.57
PALB2-201ENST00000261584 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.57
PALB2-201ENST00000261584 EYA2O00167 538 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 CPS1P31327 1500 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 TRIM21P19474 475 aaKnown RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 UBXN1Q04323 297 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 KCTD19Q17RG1 926 aaPredicted RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 PARD6BQ9BYG5 372 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 TDRD12Q587J7 1177 aaKnown RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 ELP1O95163 1332 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
PALB2-201ENST00000261584 ODF2Q5BJF6 829 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 TRIM47Q96LD4 638 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
PALB2-201ENST00000261584 AKR1B15C9JRZ8 316 aaPredicted RBP11.5□□□□□ -0.57
PALB2-201ENST00000261584 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
PALB2-201ENST00000261584 E2F4Q16254 413 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 CCDC178Q5BJE1 867 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 IQGAP1P46940 1657 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 PRKAB2O43741 272 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 MTIF2P46199 727 aaKnown RBP11.5□□□□□ -0.57
PALB2-201ENST00000261584 RBM6P78332 1123 aaKnown RBP11.5□□□□□ -0.57
PALB2-201ENST00000261584 SCARF1Q14162 830 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 TXLNBQ8N3L3 684 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 ANGEL1Q9UNK9 670 aaKnown RBP11.5□□□□□ -0.57
PALB2-201ENST00000261584 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 CRB1P82279 1406 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 MNAT1P51948 309 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 ANKLE2Q86XL3 938 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 SDR42E1Q8WUS8 393 aa11.5□□□□□ -0.57
PALB2-201ENST00000261584 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 KRT9P35527 623 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 TXLNAP40222 546 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 POSTNQ15063 836 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 HAUS7Q99871 368 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 HGSO14964 777 aaPredicted RBP11.49□□□□□ -0.57
PALB2-201ENST00000261584 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 MAP3K12Q12852 859 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 IFT81Q8WYA0 676 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 ANKRD18BA2A2Z9 1011 aa11.49□□□□□ -0.57
PALB2-201ENST00000261584 CYP7A1P22680 504 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms