RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TBC1D16Q8TBP0 767 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 SGIP1Q9BQI5 828 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 PRC1O43663 620 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 ATP2B4P23634 1241 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 SCRN1Q12765 414 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 LCORLQ8N3X6 602 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 CHAMP1Q96JM3 812 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 NACAP1Q9BZK3 213 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 NAPBQ9H115 298 aa32.62■■■□□ 2.81
CCM2-201ENST00000258781 CCDC88AQ3V6T2 1871 aa32.61■■■□□ 2.81
CCM2-201ENST00000258781 GSG1L2A8MUP6 293 aa32.61■■■□□ 2.81
CCM2-201ENST00000258781 TBC1D10CQ8IV04 446 aa32.61■■■□□ 2.81
CCM2-201ENST00000258781 TMED8Q6PL24 325 aaPredicted RBP32.61■■■□□ 2.81
CCM2-201ENST00000258781 CNKSR1Q969H4 720 aa32.61■■■□□ 2.81
CCM2-201ENST00000258781 CHST3Q7LGC8 479 aa32.6■■■□□ 2.81
CCM2-201ENST00000258781 SMARCC2Q8TAQ2 1214 aa32.6■■■□□ 2.81
CCM2-201ENST00000258781 ANTXR2P58335 489 aa32.59■■■□□ 2.81
CCM2-201ENST00000258781 C15orf52Q6ZUT6 534 aaKnown RBP32.59■■■□□ 2.81
CCM2-201ENST00000258781 SLC4A4Q9Y6R1 1079 aa32.59■■■□□ 2.81
CCM2-201ENST00000258781 PDIA3P30101 505 aaKnown RBP32.59■■■□□ 2.81
CCM2-201ENST00000258781 VPS37CA5D8V6 355 aaPredicted RBP32.58■■■□□ 2.81
CCM2-201ENST00000258781 DPEP1P16444 411 aa32.58■■■□□ 2.81
CCM2-201ENST00000258781 KCNA3P22001 575 aa32.58■■■□□ 2.81
CCM2-201ENST00000258781 TMEM87AQ8NBN3 555 aa32.58■■■□□ 2.81
CCM2-201ENST00000258781 MAGEB6P1A0A0J9YX57 407 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 MIGA1Q8NAN2 632 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 C6orf229H3BNL8 230 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 IGSF3O75054 1194 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 PTGER2P43116 358 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 ADGRA1Q86SQ6 560 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 MPNDQ8N594 471 aa32.57■■■□□ 2.8
CCM2-201ENST00000258781 ZNF219Q9P2Y4 722 aaPredicted RBP32.57■■■□□ 2.8
CCM2-201ENST00000258781 JAK2O60674 1132 aa32.56■■■□□ 2.8
CCM2-201ENST00000258781 DTNBO60941 627 aa32.56■■■□□ 2.8
CCM2-201ENST00000258781 MBD3O95983 291 aa32.56■■■□□ 2.8
CCM2-201ENST00000258781 HMGN5P82970 282 aaKnown RBP32.56■■■□□ 2.8
CCM2-201ENST00000258781 NAA16Q6N069 864 aaPredicted RBP32.56■■■□□ 2.8
CCM2-201ENST00000258781 C7orf43Q8WVR3 580 aa32.56■■■□□ 2.8
CCM2-201ENST00000258781 ISY1Q9ULR0 285 aaKnown RBP32.56■■■□□ 2.8
CCM2-201ENST00000258781 PRKAB2O43741 272 aa32.55■■■□□ 2.8
CCM2-201ENST00000258781 NSUN7Q8NE18 718 aaKnown RBP32.55■■■□□ 2.8
CCM2-201ENST00000258781 FSD2A1L4K1 749 aa32.54■■■□□ 2.8
CCM2-201ENST00000258781 TDO2P48775 406 aa32.54■■■□□ 2.8
CCM2-201ENST00000258781 DPP8Q6V1X1 898 aaPredicted RBP32.54■■■□□ 2.8
CCM2-201ENST00000258781 RIOK1Q9BRS2 568 aaKnown RBP32.54■■■□□ 2.8
CCM2-201ENST00000258781 SNED1Q8TER0 1413 aa32.54■■■□□ 2.8
CCM2-201ENST00000258781 BRCA1P38398 1863 aaKnown RBP32.54■■■□□ 2.8
CCM2-201ENST00000258781 CNNM2Q9H8M5 875 aa32.54■■■□□ 2.8
CCM2-201ENST00000258781 KIF3AQ9Y496 699 aa32.54■■■□□ 2.8
CCM2-201ENST00000258781 SRCAPQ6ZRS2 3230 aa32.53■■■□□ 2.8
CCM2-201ENST00000258781 L1TD1Q5T7N2 865 aaKnown RBP32.53■■■□□ 2.8
CCM2-201ENST00000258781 GPT2Q8TD30 523 aa32.53■■■□□ 2.8
CCM2-201ENST00000258781 ZNF804AQ7Z570 1209 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 NSUN4Q96CB9 384 aaKnown RBP32.52■■■□□ 2.8
CCM2-201ENST00000258781 TMX4Q9H1E5 349 aaPredicted RBP32.52■■■□□ 2.8
CCM2-201ENST00000258781 GPHNQ9NQX3 736 aaPredicted RBP32.52■■■□□ 2.8
CCM2-201ENST00000258781 NEDD4P46934 1319 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 GOLGA6L3A6NEY3 463 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 CTDNEP1O95476 244 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 FOXD4L6Q3SYB3 417 aaPredicted RBP32.52■■■□□ 2.8
CCM2-201ENST00000258781 FOXD4L3Q6VB84 417 aaPredicted RBP32.52■■■□□ 2.8
CCM2-201ENST00000258781 CDC37L1Q7L3B6 337 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 ZNF384Q8TF68 577 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 TMEM87BQ96K49 555 aa32.52■■■□□ 2.8
CCM2-201ENST00000258781 SALL1Q9NSC2 1324 aa32.51■■■□□ 2.8
CCM2-201ENST00000258781 AKNAD1Q5T1N1 836 aa32.51■■■□□ 2.79
CCM2-201ENST00000258781 SPTY2D1Q68D10 685 aaPredicted RBP32.51■■■□□ 2.79
CCM2-201ENST00000258781 TTLL6Q8N841 843 aa32.51■■■□□ 2.79
CCM2-201ENST00000258781 TDRD7Q8NHU6 1098 aaKnown RBP32.51■■■□□ 2.79
CCM2-201ENST00000258781 NAP1L2Q9ULW6 460 aaPredicted RBP32.51■■■□□ 2.79
CCM2-201ENST00000258781 ANGEL1Q9UNK9 670 aaKnown RBP32.51■■■□□ 2.79
CCM2-201ENST00000258781 JAG2Q9Y219 1238 aa32.51■■■□□ 2.79
CCM2-201ENST00000258781 CCT2P78371 535 aaKnown RBP32.5■■■□□ 2.79
CCM2-201ENST00000258781 CHAF1AQ13111 956 aaPredicted RBP32.5■■■□□ 2.79
CCM2-201ENST00000258781 CYB5R4Q7L1T6 521 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 FAM184AQ8NB25 1140 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 STAG1Q8WVM7 1258 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 KRT23Q9C075 422 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 KLF18A0A0U1RQI7 1052 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 PTPDC1A2A3K4 754 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 B4E1Z4 1266 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 NCLP19338 710 aaKnown RBP32.5■■■□□ 2.79
CCM2-201ENST00000258781 MECOMQ03112 1051 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 USP48Q86UV5 1035 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 CD209Q9NNX6 404 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 BRPF3Q9ULD4 1205 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 CNPY2Q9Y2B0 182 aa32.5■■■□□ 2.79
CCM2-201ENST00000258781 RIMBP2O15034 1052 aa32.49■■■□□ 2.79
CCM2-201ENST00000258781 TGFB2P61812 414 aa32.49■■■□□ 2.79
CCM2-201ENST00000258781 CTDSPL2Q05D32 466 aa32.49■■■□□ 2.79
CCM2-201ENST00000258781 CSPP1Q1MSJ5 1256 aa32.49■■■□□ 2.79
CCM2-201ENST00000258781 PPP1R1BQ9UD71 204 aaPredicted RBP32.49■■■□□ 2.79
CCM2-201ENST00000258781 SH2B2O14492 632 aaPredicted RBP32.48■■■□□ 2.79
CCM2-201ENST00000258781 C21orf2O43822 256 aa32.48■■■□□ 2.79
CCM2-201ENST00000258781 DHX16O60231 1041 aaKnown RBP32.48■■■□□ 2.79
CCM2-201ENST00000258781 WDR66Q8TBY9 1149 aa32.48■■■□□ 2.79
CCM2-201ENST00000258781 NCOA5Q9HCD5 579 aaKnown RBP32.48■■■□□ 2.79
CCM2-201ENST00000258781 GIMAP6Q6P9H5 292 aa32.48■■■□□ 2.79
CCM2-201ENST00000258781 MFSD6Q6ZSS7 791 aa32.48■■■□□ 2.79
CCM2-201ENST00000258781 DDX11Q96FC9 970 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms