RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
TCN1-201ENST00000257264 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 APBB1IPQ7Z5R6 666 aaPredicted RBP6.63□□□□□ -1.35
TCN1-201ENST00000257264 CNTNAP3BQ96NU0 1288 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 APBA2Q99767 749 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 CNTNAP3Q9BZ76 1288 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 EHMT1Q9H9B1 1298 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.63□□□□□ -1.35
TCN1-201ENST00000257264 TMEM39AQ9NV64 488 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 CEP162Q5TB80 1403 aa6.63□□□□□ -1.35
TCN1-201ENST00000257264 A0A087X0B3 334 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 A0A1B0GTH6 734 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 A0A1W2PQH9 124 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 B2RBV5 119 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 IRS4O14654 1257 aaPredicted RBP6.62□□□□□ -1.35
TCN1-201ENST00000257264 PDE8AO60658 829 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 KRT18P05783 430 aaKnown RBP6.62□□□□□ -1.35
TCN1-201ENST00000257264 FAM153BP0C7A2 387 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 PPP2R3AQ06190 1150 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 HYAL2Q12891 473 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 RALBP1Q15311 655 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 AXDND1Q5T1B0 1012 aaPredicted RBP6.62□□□□□ -1.35
TCN1-201ENST00000257264 WWC2Q6AWC2 1192 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 SPATA9Q9BWV2 254 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
TCN1-201ENST00000257264 CYP8B1Q9UNU6 501 aa6.62□□□□□ -1.35
TCN1-201ENST00000257264 A0A096LPE4 126 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 RFPL3O75679 317 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 KIF4AO95239 1232 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 TARSP26639 723 aaKnown RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 CCINQ13939 588 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 HGSNATQ68CP4 663 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 KRT25Q7Z3Z0 450 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 TTC6Q86TZ1 520 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 NLRP8Q86W28 1048 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 ATL2Q8NHH9 583 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 BHLHE41Q9C0J9 482 aaPredicted RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 KCNH4Q9UQ05 1017 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 WASHC2CQ9Y4E1 1318 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 GOLGA3Q08378 1498 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 PSAPP07602 524 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 RARAP10276 462 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 TIMP2P16035 220 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 KCNQ4P56696 695 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 FAAP100Q0VG06 881 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 PABPC4Q13310 644 aaKnown RBP eCLIP6.61□□□□□ -1.35
TCN1-201ENST00000257264 HLTFQ14527 1009 aaKnown RBP eCLIP6.61□□□□□ -1.35
TCN1-201ENST00000257264 LRRC14Q15048 493 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 LRRFIP1Q32MZ4 808 aaKnown RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 LRRC47Q8N1G4 583 aaKnown RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 ZCCHC2Q9C0B9 1178 aaKnown RBP6.61□□□□□ -1.35
TCN1-201ENST00000257264 PEG3Q9GZU2 1588 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 ZNF576Q9H609 170 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 TIMMDC1Q9NPL8 285 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
TCN1-201ENST00000257264 IQCA1LA6NCM1 817 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 METTL12A8MUP2 240 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 SPINT1O43278 529 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 ATE1O95260 518 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 NCAPHQ15003 741 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 AKAP4Q5JQC9 854 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 MRM1Q6IN84 353 aaKnown RBP6.6□□□□□ -1.35
TCN1-201ENST00000257264 PRICKLE2Q7Z3G6 844 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 UBR7Q8N806 425 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 CEP120Q8N960 986 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 SLC12A7Q9Y666 1083 aa6.6□□□□□ -1.35
TCN1-201ENST00000257264 RASGRP1O95267 797 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 ACPPP15309 386 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 CPEP16870 476 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 GUCY2CP25092 1073 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 SOX18P35713 384 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 GUCY2FP51841 1108 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 C4orf46Q504U0 113 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 SAMD5Q5TGI4 173 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 RNF180Q86T96 592 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 TMEM102Q8N9M5 508 aaPredicted RBP6.59□□□□□ -1.35
TCN1-201ENST00000257264 NXPE3Q969Y0 559 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 KIF2CQ99661 725 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 GSX2Q9BZM3 304 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 EPN3Q9H201 632 aa6.59□□□□□ -1.35
TCN1-201ENST00000257264 ADCY3O60266 1144 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 TRPA1O75762 1119 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 BMP6P22004 513 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 NME2P22392 152 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
TCN1-201ENST00000257264 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
TCN1-201ENST00000257264 ZSCAN1Q8NBB4 408 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 SNIP1Q8TAD8 396 aaKnown RBP6.58□□□□□ -1.36
TCN1-201ENST00000257264 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 TRERF1Q96PN7 1200 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms