RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SPTY2D1Q68D10 685 aaPredicted RBP22.33■■□□□ 1.17
TRIM47-201ENST00000254816 TACC3Q9Y6A5 838 aa22.33■■□□□ 1.17
TRIM47-201ENST00000254816 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.17
TRIM47-201ENST00000254816 GJB2P29033 226 aa22.33■■□□□ 1.16
TRIM47-201ENST00000254816 ANTXR2P58335 489 aa22.33■■□□□ 1.16
TRIM47-201ENST00000254816 NEDD4P46934 1319 aa22.33■■□□□ 1.16
TRIM47-201ENST00000254816 GOLGA6L3A6NEY3 463 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 PRC1O43663 620 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 L1TD1Q5T7N2 865 aaKnown RBP22.32■■□□□ 1.16
TRIM47-201ENST00000254816 STYK1Q6J9G0 422 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 AGXT2Q9BYV1 514 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 MCM5P33992 734 aa22.32■■□□□ 1.16
TRIM47-201ENST00000254816 B4E1Z4 1266 aa22.31■■□□□ 1.16
TRIM47-201ENST00000254816 SMIM22K7EJ46 135 aa22.31■■□□□ 1.16
TRIM47-201ENST00000254816 TRDNQ13061 729 aa22.31■■□□□ 1.16
TRIM47-201ENST00000254816 DIXDC1Q155Q3 683 aa22.31■■□□□ 1.16
TRIM47-201ENST00000254816 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
TRIM47-201ENST00000254816 CYB5R4Q7L1T6 521 aa22.31■■□□□ 1.16
TRIM47-201ENST00000254816 ZC3H12CQ9C0D7 883 aaKnown RBP22.31■■□□□ 1.16
TRIM47-201ENST00000254816 NAP1L2Q9ULW6 460 aaPredicted RBP22.31■■□□□ 1.16
TRIM47-201ENST00000254816 FSD2A1L4K1 749 aa22.3■■□□□ 1.16
TRIM47-201ENST00000254816 DOK7Q18PE1 504 aa22.3■■□□□ 1.16
TRIM47-201ENST00000254816 GTF3C6Q969F1 213 aa22.3■■□□□ 1.16
TRIM47-201ENST00000254816 CHAMP1Q96JM3 812 aa22.3■■□□□ 1.16
TRIM47-201ENST00000254816 MINDY4BA8MYZ0 360 aa22.29■■□□□ 1.16
TRIM47-201ENST00000254816 BRD1O95696 1058 aa22.29■■□□□ 1.16
TRIM47-201ENST00000254816 BAG4O95429 457 aaKnown RBP22.29■■□□□ 1.16
TRIM47-201ENST00000254816 SCRN1Q12765 414 aa22.29■■□□□ 1.16
TRIM47-201ENST00000254816 CYP2D7A0A087X1C5 515 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 GTF2IP78347 998 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 MFSD14BQ5SR56 506 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 CCT2P78371 535 aaKnown RBP22.28■■□□□ 1.16
TRIM47-201ENST00000254816 PPARAQ07869 468 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 AKNAD1Q5T1N1 836 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
TRIM47-201ENST00000254816 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRIM47-201ENST00000254816 SYT1P21579 422 aa22.27■■□□□ 1.16
TRIM47-201ENST00000254816 RRP12Q5JTH9 1297 aaKnown RBP22.27■■□□□ 1.16
TRIM47-201ENST00000254816 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
TRIM47-201ENST00000254816 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
TRIM47-201ENST00000254816 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
TRIM47-201ENST00000254816 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
TRIM47-201ENST00000254816 LAMB1P07942 1786 aa22.27■■□□□ 1.15
TRIM47-201ENST00000254816 C10orf71Q711Q0 1435 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 JAK2O60674 1132 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 PFKFB2O60825 505 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 PDIA3P30101 505 aaKnown RBP22.26■■□□□ 1.15
TRIM47-201ENST00000254816 EVX2Q03828 476 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 CRNKL1Q9BZJ0 848 aaKnown RBP22.26■■□□□ 1.15
TRIM47-201ENST00000254816 TCHHQ07283 1943 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 KDM4AO75164 1064 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 RAB11FIP4Q86YS3 637 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 FBXL16Q8N461 479 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 STAG1Q8WVM7 1258 aa22.26■■□□□ 1.15
TRIM47-201ENST00000254816 NCOA5Q9HCD5 579 aaKnown RBP22.26■■□□□ 1.15
TRIM47-201ENST00000254816 ZBTB7AO95365 584 aa22.25■■□□□ 1.15
TRIM47-201ENST00000254816 CLEC17AQ6ZS10 378 aa22.25■■□□□ 1.15
TRIM47-201ENST00000254816 PANK2Q9BZ23 570 aa22.25■■□□□ 1.15
TRIM47-201ENST00000254816 FAM205AQ6ZU69 1335 aa22.25■■□□□ 1.15
TRIM47-201ENST00000254816 STX6O43752 255 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 GSTO1P78417 241 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 FOXD4L6Q3SYB3 417 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 CTR9Q6PD62 1173 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 FOXD4L3Q6VB84 417 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 CCDC125Q86Z20 511 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 SH3RF3Q8TEJ3 882 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 MXD3Q9BW11 206 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 ZSWIM5Q9P217 1185 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 WDR19Q8NEZ3 1342 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 KLF18A0A0U1RQI7 1052 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 USP17L21D6R901 530 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 G3V3G9 751 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 DCAF8Q5TAQ9 597 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 MCTP1Q6DN14 999 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 SLC16A10Q8TF71 515 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 ZNF274Q96GC6 653 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 DBNDD1Q9H9R9 158 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 SENP2Q9HC62 589 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 MROH7-TTC4A0A0A0MT08 1334 aa22.24■■□□□ 1.15
TRIM47-201ENST00000254816 WDR33Q9C0J8 1336 aaKnown RBP22.24■■□□□ 1.15
TRIM47-201ENST00000254816 SLC4A8Q2Y0W8 1093 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 C7orf43Q8WVR3 580 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 EYA3Q99504 573 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 TMED8Q6PL24 325 aaPredicted RBP22.23■■□□□ 1.15
TRIM47-201ENST00000254816 TBC1D22AQ8WUA7 517 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 RTFDC1Q9BY42 306 aaPredicted RBP22.23■■□□□ 1.15
TRIM47-201ENST00000254816 CNNM2Q9H8M5 875 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 NAV1Q8NEY1 1877 aa22.23■■□□□ 1.15
TRIM47-201ENST00000254816 SCN9AQ15858 1988 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-201ENST00000254816 GOLGA6L22H0YM25 854 aa22.22■■□□□ 1.15
TRIM47-201ENST00000254816 SH2B2O14492 632 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-201ENST00000254816 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-201ENST00000254816 DDX11Q96FC9 970 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms