RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 HSPA1BP0DMV9 641 aaKnown RBP30.69■■■□□ 2.5
LSM7-201ENST00000252622 NOGQ13253 232 aa30.69■■■□□ 2.5
LSM7-201ENST00000252622 MAP3K11Q16584 847 aa30.69■■■□□ 2.5
LSM7-201ENST00000252622 NSUN4Q96CB9 384 aaKnown RBP30.69■■■□□ 2.5
LSM7-201ENST00000252622 TMEM39BQ9GZU3 492 aa30.69■■■□□ 2.5
LSM7-201ENST00000252622 PCDHB15Q9Y5E8 787 aa30.69■■■□□ 2.5
LSM7-201ENST00000252622 RPAP1Q9BWH6 1393 aaPredicted RBP30.68■■■□□ 2.5
LSM7-201ENST00000252622 PPP1R12BO60237 982 aaPredicted RBP30.68■■■□□ 2.5
LSM7-201ENST00000252622 AOC2O75106 756 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 CYP2E1P05181 493 aaPredicted RBP30.68■■■□□ 2.5
LSM7-201ENST00000252622 SLC10A3P09131 477 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 IFIT2P09913 472 aaKnown RBP30.68■■■□□ 2.5
LSM7-201ENST00000252622 GSTO1P78417 241 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 ZNF384Q8TF68 577 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 DCTPP1Q9H773 170 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 RAI14Q9P0K7 980 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 LRP2BPQ9P2M1 347 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 MAST2Q6P0Q8 1798 aa30.68■■■□□ 2.5
LSM7-201ENST00000252622 ZAP70P43403 619 aa30.67■■■□□ 2.5
LSM7-201ENST00000252622 MAP2K1Q02750 393 aaPredicted RBP30.67■■■□□ 2.5
LSM7-201ENST00000252622 LRRCC1Q9C099 1032 aa30.67■■■□□ 2.5
LSM7-201ENST00000252622 USP40Q9NVE5 1235 aa30.67■■■□□ 2.5
LSM7-201ENST00000252622 ANGEL1Q9UNK9 670 aaKnown RBP30.67■■■□□ 2.5
LSM7-201ENST00000252622 LDHCP07864 332 aa30.66■■■□□ 2.5
LSM7-201ENST00000252622 PRKG1Q13976 671 aa30.66■■■□□ 2.5
LSM7-201ENST00000252622 LDLRAD1Q5T700 205 aa30.66■■■□□ 2.5
LSM7-201ENST00000252622 WBP1LQ9NX94 342 aa30.66■■■□□ 2.5
LSM7-201ENST00000252622 RASAL3Q86YV0 1011 aa30.65■■■□□ 2.5
LSM7-201ENST00000252622 CDAN1Q8IWY9 1227 aa30.65■■■□□ 2.5
LSM7-201ENST00000252622 RFX7Q2KHR2 1363 aa30.65■■■□□ 2.5
LSM7-201ENST00000252622 GPR75-ASB3A0A0A6YYF3 556 aa30.64■■■□□ 2.5
LSM7-201ENST00000252622 UNCXA6NJT0 531 aa30.64■■■□□ 2.5
LSM7-201ENST00000252622 BTDP43251 543 aa30.64■■■□□ 2.5
LSM7-201ENST00000252622 AAMPQ13685 434 aa30.64■■■□□ 2.5
LSM7-201ENST00000252622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.64■■■□□ 2.5
LSM7-201ENST00000252622 FAM151AQ8WW52 585 aa30.63■■■□□ 2.49
LSM7-201ENST00000252622 IDI2Q9BXS1 227 aa30.63■■■□□ 2.49
LSM7-201ENST00000252622 PIH1D3Q9NQM4 214 aaKnown RBP30.63■■■□□ 2.49
LSM7-201ENST00000252622 FZD1Q9UP38 647 aa30.63■■■□□ 2.49
LSM7-201ENST00000252622 IREB2P48200 963 aaKnown RBP30.62■■■□□ 2.49
LSM7-201ENST00000252622 NFIAQ12857 509 aa30.62■■■□□ 2.49
LSM7-201ENST00000252622 USP2O75604 605 aaPredicted RBP30.61■■■□□ 2.49
LSM7-201ENST00000252622 MAP4K4O95819 1239 aaPredicted RBP30.61■■■□□ 2.49
LSM7-201ENST00000252622 AIDAQ96BJ3 306 aa30.61■■■□□ 2.49
LSM7-201ENST00000252622 HOOK2Q96ED9 719 aa30.61■■■□□ 2.49
LSM7-201ENST00000252622 FAM198AQ9UFP1 575 aa30.61■■■□□ 2.49
LSM7-201ENST00000252622 NAA16Q6N069 864 aaPredicted RBP30.6■■■□□ 2.49
LSM7-201ENST00000252622 ZIC5Q96T25 663 aa30.6■■■□□ 2.49
LSM7-201ENST00000252622 RHBDL3P58872 404 aa30.59■■■□□ 2.49
LSM7-201ENST00000252622 SMARCA5O60264 1052 aaPredicted RBP30.58■■■□□ 2.49
LSM7-201ENST00000252622 ENTPD3O75355 529 aa30.58■■■□□ 2.49
LSM7-201ENST00000252622 WDHD1O75717 1129 aaPredicted RBP30.58■■■□□ 2.49
LSM7-201ENST00000252622 NDUFB9Q9Y6M9 179 aa30.58■■■□□ 2.49
LSM7-201ENST00000252622 DOCK2Q92608 1830 aa30.57■■■□□ 2.48
LSM7-201ENST00000252622 RGS3P49796 1198 aa30.57■■■□□ 2.48
LSM7-201ENST00000252622 KIF23Q02241 960 aaPredicted RBP30.57■■■□□ 2.48
LSM7-201ENST00000252622 TCP10Q12799 353 aa30.57■■■□□ 2.48
LSM7-201ENST00000252622 TMED8Q6PL24 325 aaPredicted RBP30.57■■■□□ 2.48
LSM7-201ENST00000252622 ANKRD13AQ8IZ07 590 aa30.57■■■□□ 2.48
LSM7-201ENST00000252622 BCL11AQ9H165 835 aa30.57■■■□□ 2.48
LSM7-201ENST00000252622 SUPT16HQ9Y5B9 1047 aaKnown RBP30.57■■■□□ 2.48
LSM7-201ENST00000252622 FOXN1O15353 648 aa30.56■■■□□ 2.48
LSM7-201ENST00000252622 TTF1Q15361 905 aaPredicted RBP30.56■■■□□ 2.48
LSM7-201ENST00000252622 NOL10Q9BSC4 688 aaKnown RBP30.56■■■□□ 2.48
LSM7-201ENST00000252622 BEGAINQ9BUH8 593 aa30.56■■■□□ 2.48
LSM7-201ENST00000252622 ANTXR1Q9H6X2 564 aa30.56■■■□□ 2.48
LSM7-201ENST00000252622 MYO5AQ9Y4I1 1855 aaKnown RBP30.55■■■□□ 2.48
LSM7-201ENST00000252622 NPM3O75607 178 aaKnown RBP30.55■■■□□ 2.48
LSM7-201ENST00000252622 IDH1O75874 414 aaKnown RBP30.55■■■□□ 2.48
LSM7-201ENST00000252622 ATP5JP18859 108 aa30.55■■■□□ 2.48
LSM7-201ENST00000252622 DCAF15Q66K64 600 aa30.55■■■□□ 2.48
LSM7-201ENST00000252622 REM2Q8IYK8 340 aaPredicted RBP30.55■■■□□ 2.48
LSM7-201ENST00000252622 OTOFQ9HC10 1997 aa30.55■■■□□ 2.48
LSM7-201ENST00000252622 BAG3O95817 575 aa30.54■■■□□ 2.48
LSM7-201ENST00000252622 MAP3K12Q12852 859 aa30.54■■■□□ 2.48
LSM7-201ENST00000252622 HDAC1Q13547 482 aaPredicted RBP30.54■■■□□ 2.48
LSM7-201ENST00000252622 IFFO2Q5TF58 517 aa30.54■■■□□ 2.48
LSM7-201ENST00000252622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.54■■■□□ 2.481e-14■■■□□ 16.2
LSM7-201ENST00000252622 SLC10A4Q96EP9 437 aa30.54■■■□□ 2.48
LSM7-201ENST00000252622 CLMNQ96JQ2 1002 aa30.54■■■□□ 2.48
LSM7-201ENST00000252622 CTCFP49711 727 aaPredicted RBP30.53■■■□□ 2.48
LSM7-201ENST00000252622 PPP4CP60510 307 aa30.53■■■□□ 2.48
LSM7-201ENST00000252622 ADGRA1Q86SQ6 560 aa30.53■■■□□ 2.48
LSM7-201ENST00000252622 ZFPM1Q8IX07 1006 aa30.53■■■□□ 2.48
LSM7-201ENST00000252622 DDX4Q9NQI0 724 aaKnown RBP30.53■■■□□ 2.48
LSM7-201ENST00000252622 CA12O43570 354 aa30.52■■■□□ 2.48
LSM7-201ENST00000252622 PLCG2P16885 1265 aa30.52■■■□□ 2.48
LSM7-201ENST00000252622 SPRYD7Q5W111 196 aa30.52■■■□□ 2.48
LSM7-201ENST00000252622 DNAJC2Q99543 621 aaKnown RBP30.52■■■□□ 2.48
LSM7-201ENST00000252622 MAP3K9P80192 1104 aa30.51■■■□□ 2.47
LSM7-201ENST00000252622 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.51■■■□□ 2.47
LSM7-201ENST00000252622 CSRNP1Q96S65 589 aa30.51■■■□□ 2.47
LSM7-201ENST00000252622 ZNF341Q9BYN7 854 aa30.51■■■□□ 2.47
LSM7-201ENST00000252622 AATFQ9NY61 560 aaKnown RBP eCLIP30.51■■■□□ 2.47
LSM7-201ENST00000252622 COL2A1P02458 1487 aaPredicted RBP30.5■■■□□ 2.47
LSM7-201ENST00000252622 GOLIM4O00461 696 aa30.5■■■□□ 2.47
LSM7-201ENST00000252622 ZBTB48P10074 688 aaPredicted RBP30.5■■■□□ 2.47
LSM7-201ENST00000252622 CYP7A1P22680 504 aa30.5■■■□□ 2.47
LSM7-201ENST00000252622 PICALMQ13492 652 aa30.5■■■□□ 2.47
LSM7-201ENST00000252622 TEX11Q8IYF3 940 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms