RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 TFAP4Q01664 338 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RRAGBQ5VZM2 374 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SULF1Q8IWU6 871 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 USP17L21D6R901 530 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 MMP10P09238 476 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 JAKMIP3Q5VZ66 844 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PATL2C9JE40 543 aaKnown RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ZBED4O75132 1171 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 YEATS4O95619 227 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 MCM7P33993 719 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 TEX35Q5T0J7 233 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CPA1P15085 419 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PDE6AP16499 860 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 IRX3P78415 501 aaPredicted RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CIAO1O76071 339 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SP4Q02446 784 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ISM2Q6H9L7 571 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DSCC1Q9BVC3 393 aa13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SCNN1DP51172 638 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CPXCR1Q8N123 301 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 UNC13BO14795 1591 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PSMA7O14818 248 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SEMA3EO15041 775 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 AKNAD1Q5T1N1 836 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 RNF123Q5XPI4 1314 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 KRT13P13646 458 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SMCR8Q8TEV9 937 aaPredicted RBP13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DRC1Q96MC2 740 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 AS3MTQ9HBK9 375 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 GPR108Q9NPR9 543 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DHX58Q96C10 678 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SPATA31A6Q5VVP1 1343 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ZSCAN12O43309 604 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 RILPL1Q5EBL4 403 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 TULP4Q9NRJ4 1543 aa13.87□□□□□ -0.19
ZKSCAN3-201ENST00000252211 N4BP3O15049 544 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 FAM13AO94988 1023 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PHKA1P46020 1223 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SPAG1Q07617 926 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PPARAQ07869 468 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 NSMFQ6X4W1 530 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 HAUS7Q99871 368 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 OVOS2A0A0G2JMS6 1433 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 OVOS2A0A0J9YW53 1432 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 OVOS2Q6IE36 1432 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 KLHL40Q2TBA0 621 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ADRA2BP18089 450 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PHACTR2O75167 634 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 NPR1P16066 1061 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 BTDP43251 543 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
ZKSCAN3-201ENST00000252211 IQUBQ8NA54 791 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 TCP10L2B9ZVM9 353 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 ATL3Q6DD88 541 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 DACT1Q9NYF0 836 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 PUF60Q9UHX1 559 aaKnown RBP13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 AGLP35573 1532 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 HSPA1LP34931 641 aa13.85□□□□□ -0.19
ZKSCAN3-201ENST00000252211 TTLL6Q8N841 843 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms