RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
MBD4-201ENST00000249910 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
MBD4-201ENST00000249910 QTRT2Q9H974 415 aaKnown RBP17.26■□□□□ 0.35
MBD4-201ENST00000249910 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
MBD4-201ENST00000249910 ORC3Q9UBD5 711 aaPredicted RBP17.26■□□□□ 0.35
MBD4-201ENST00000249910 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 DYNLL1P63167 89 aaKnown RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 IGDCC4Q8TDY8 1250 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 CDC27P30260 824 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 PHKBQ93100 1093 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
MBD4-201ENST00000249910 ELP1O95163 1332 aa17.25■□□□□ 0.35
MBD4-201ENST00000249910 UTRNP46939 3433 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
MBD4-201ENST00000249910 ALX1Q15699 326 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 MFSD6Q6ZSS7 791 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 CYP2D7A0A087X1C5 515 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
MBD4-201ENST00000249910 NR1I2O75469 434 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
MBD4-201ENST00000249910 TMEM67Q5HYA8 995 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 AKNAD1Q5T1N1 836 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 CKAP2LQ8IYA6 745 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 NACAP1Q9BZK3 213 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
MBD4-201ENST00000249910 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
MBD4-201ENST00000249910 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
MBD4-201ENST00000249910 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
MBD4-201ENST00000249910 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 TRIM37O94972 964 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 PRDX5P30044 214 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 EVX2Q03828 476 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 FBXO33Q7Z6M2 555 aa17.23■□□□□ 0.35
MBD4-201ENST00000249910 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
MBD4-201ENST00000249910 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
MBD4-201ENST00000249910 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
MBD4-201ENST00000249910 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
MBD4-201ENST00000249910 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
MBD4-201ENST00000249910 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
MBD4-201ENST00000249910 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
MBD4-201ENST00000249910 RIOK1Q9BRS2 568 aaKnown RBP17.22■□□□□ 0.35
MBD4-201ENST00000249910 PRDM1O75626 825 aa17.21■□□□□ 0.35
MBD4-201ENST00000249910 CMTR1Q8N1G2 835 aaKnown RBP17.21■□□□□ 0.35
MBD4-201ENST00000249910 MPNDQ8N594 471 aa17.21■□□□□ 0.35
MBD4-201ENST00000249910 FBXO18Q8NFZ0 1043 aa17.21■□□□□ 0.35
MBD4-201ENST00000249910 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
MBD4-201ENST00000249910 ESPNB1AK53 854 aa17.21■□□□□ 0.34
MBD4-201ENST00000249910 ZBTB43O43298 467 aa17.21■□□□□ 0.34
MBD4-201ENST00000249910 GNAT2P19087 354 aa17.21■□□□□ 0.34
MBD4-201ENST00000249910 WDR19Q8NEZ3 1342 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 MECOMQ03112 1051 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 PPARAQ07869 468 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 TMEM87BQ96K49 555 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 FUCA2Q9BTY2 467 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
MBD4-201ENST00000249910 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
MBD4-201ENST00000249910 ARAP2Q8WZ64 1704 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
MBD4-201ENST00000249910 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
MBD4-201ENST00000249910 ZMYM6O95789 1325 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 RGL2O15211 777 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 LETM1O95202 739 aaPredicted RBP17.19■□□□□ 0.34
MBD4-201ENST00000249910 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 PDLIM2Q96JY6 352 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 STAG1Q8WVM7 1258 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
MBD4-201ENST00000249910 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 RANBP6O60518 1105 aaKnown RBP17.18■□□□□ 0.34
MBD4-201ENST00000249910 GYS1P13807 737 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 ME1P48163 572 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 SGMS1Q86VZ5 419 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 KRT23Q9C075 422 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 RCOR1Q9UKL0 485 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 LAMB2P55268 1798 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 NTRK3Q16288 839 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms