RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ATP10DQ9P241 1426 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 DEXIO95424 95 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
SIN3B-201ENST00000248054 CHST3Q7LGC8 479 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 FAM114A1Q8IWE2 563 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 ARMT1Q9H993 441 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 BCL2L12Q9HB09 334 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 CPA1P15085 419 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 CALRP27797 417 aaKnown RBP18■□□□□ 0.47
SIN3B-201ENST00000248054 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
SIN3B-201ENST00000248054 RRP36Q96EU6 259 aaKnown RBP17.99■□□□□ 0.47
SIN3B-201ENST00000248054 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
SIN3B-201ENST00000248054 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-201ENST00000248054 B4E1Z4 1266 aa17.99■□□□□ 0.47
SIN3B-201ENST00000248054 GNA11P29992 359 aa17.99■□□□□ 0.47
SIN3B-201ENST00000248054 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
SIN3B-201ENST00000248054 ZNF274Q96GC6 653 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-201ENST00000248054 PRDM4Q9UKN5 801 aa17.99■□□□□ 0.47
SIN3B-201ENST00000248054 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 GOLGA6L7A0A1B0GV03 622 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 PDE8BO95263 885 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 TUBB4AP04350 444 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 LSG1Q9H089 658 aaKnown RBP17.98■□□□□ 0.47
SIN3B-201ENST00000248054 TAF5LO75529 589 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 RILPL1Q5EBL4 403 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 MAP4K1Q92918 833 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 PAXBP1Q9Y5B6 917 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 E7EWF7 191 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 H7C1W4 665 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 POLR3GO15318 223 aaPredicted RBP17.98■□□□□ 0.47
SIN3B-201ENST00000248054 KIF5CO60282 957 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 BRD1O95696 1058 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 VAT1LQ9HCJ6 419 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 PRM3Q9NNZ6 103 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
SIN3B-201ENST00000248054 SEMA3EO15041 775 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 UBE4AQ14139 1066 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 KLHL10Q6JEL2 608 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 DBNLQ9UJU6 430 aaKnown RBP17.98■□□□□ 0.47
SIN3B-201ENST00000248054 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
SIN3B-201ENST00000248054 TEX11Q8IYF3 940 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 ERMNQ8TAM6 284 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 NAP1L4Q99733 375 aaKnown RBP17.97■□□□□ 0.47
SIN3B-201ENST00000248054 PIGBQ92521 554 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 NAPAP54920 295 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 SPAG1Q07617 926 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 HEATR3Q7Z4Q2 680 aa17.97■□□□□ 0.47
SIN3B-201ENST00000248054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.97■□□□□ 0.47
SIN3B-201ENST00000248054 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
SIN3B-201ENST00000248054 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 GABPB1Q06547 395 aaPredicted RBP17.96■□□□□ 0.47
SIN3B-201ENST00000248054 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
SIN3B-201ENST00000248054 TMEM132AQ24JP5 1023 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 ANO6Q4KMQ2 910 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 KIAA1328Q86T90 577 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 GTF3C6Q969F1 213 aa17.96■□□□□ 0.47
SIN3B-201ENST00000248054 PPFIA3O75145 1194 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 CTAGE1Q96RT6 745 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 SLIT1O75093 1534 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 PTH1RQ03431 593 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
SIN3B-201ENST00000248054 PICALMQ13492 652 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 STXBP4Q6ZWJ1 553 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 GREM2Q9H772 168 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 BIN1O00499 593 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 CASQ1P31415 396 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 FAM160A1Q05DH4 1040 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 TYRO3Q06418 890 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 TAF4BQ92750 862 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
SIN3B-201ENST00000248054 DCCP43146 1447 aa17.95■□□□□ 0.46
SIN3B-201ENST00000248054 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
SIN3B-201ENST00000248054 POLD1P28340 1107 aa17.94■□□□□ 0.46
SIN3B-201ENST00000248054 KRI1Q8N9T8 703 aaKnown RBP17.94■□□□□ 0.46
SIN3B-201ENST00000248054 LZTS2Q9BRK4 669 aa17.94■□□□□ 0.46
SIN3B-201ENST00000248054 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
SIN3B-201ENST00000248054 PDE6AP16499 860 aa17.94■□□□□ 0.46
SIN3B-201ENST00000248054 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
SIN3B-201ENST00000248054 FAM177A1Q8N128 213 aaPredicted RBP17.94■□□□□ 0.46
SIN3B-201ENST00000248054 LMBRD1Q9NUN5 540 aa17.94■□□□□ 0.46
SIN3B-201ENST00000248054 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 ELP1O95163 1332 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 FER1L4A9Z1Z3 1794 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 PARP1P09874 1014 aaKnown RBP17.93■□□□□ 0.46
SIN3B-201ENST00000248054 STAT6P42226 847 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 TMC4Q7Z404 712 aa17.93■□□□□ 0.46
SIN3B-201ENST00000248054 GPATCH11Q8N954 259 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms