RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 FAM198AQ9UFP1 575 aa20.03■□□□□ 0.8
CLPP-201ENST00000245816 SNCAIPQ9Y6H5 919 aa20.03■□□□□ 0.8
CLPP-201ENST00000245816 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 MAP3K9P80192 1104 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 FKBP1CQ5VVH2 108 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 FAM83AQ86UY5 434 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 BRI3BPQ8WY22 251 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 RCAN3Q9UKA8 241 aa20.02■□□□□ 0.8
CLPP-201ENST00000245816 A0A1B0GUL7 405 aa20.01■□□□□ 0.79
CLPP-201ENST00000245816 ZKSCAN4Q969J2 545 aaPredicted RBP20.01■□□□□ 0.79
CLPP-201ENST00000245816 XAGE2Q96GT9 111 aa20.01■□□□□ 0.79
CLPP-201ENST00000245816 HPS5Q9UPZ3 1129 aa20.01■□□□□ 0.79
CLPP-201ENST00000245816 ZBTB7BO15156 539 aaPredicted RBP20■□□□□ 0.79
CLPP-201ENST00000245816 INHBEP58166 350 aa20■□□□□ 0.79
CLPP-201ENST00000245816 CRHR2Q13324 411 aa20■□□□□ 0.79
CLPP-201ENST00000245816 PI16Q6UXB8 463 aa20■□□□□ 0.79
CLPP-201ENST00000245816 FKTNO75072 461 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 TNNI2P48788 182 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 SOX10P56693 466 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 MIGA2Q7L4E1 593 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 SH3BP5LQ7L8J4 393 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 DENND2AQ9ULE3 1009 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 MAST3O60307 1309 aa19.99■□□□□ 0.79
CLPP-201ENST00000245816 RFX7Q2KHR2 1363 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 ATRNL1Q5VV63 1379 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 INPP5BP32019 993 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 TCP10Q12799 353 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 POLA2Q14181 598 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 FAM43AQ8N2R8 423 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 FAM151AQ8WW52 585 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 GAKO14976 1311 aa19.98■□□□□ 0.79
CLPP-201ENST00000245816 RPAP1Q9BWH6 1393 aaPredicted RBP19.97■□□□□ 0.79
CLPP-201ENST00000245816 SPDYE5A6NIY4 337 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 SEMA3EO15041 775 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
CLPP-201ENST00000245816 ITPRIPQ8IWB1 547 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
CLPP-201ENST00000245816 CHMP4BQ9H444 224 aaKnown RBP19.97■□□□□ 0.79
CLPP-201ENST00000245816 USP40Q9NVE5 1235 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 HMG20BQ9P0W2 317 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 ZNF112Q9UJU3 913 aa19.97■□□□□ 0.79
CLPP-201ENST00000245816 CENPFP49454 3210 aa19.96■□□□□ 0.79
CLPP-201ENST00000245816 ALDH1A1P00352 501 aa19.96■□□□□ 0.79
CLPP-201ENST00000245816 OTUD5Q96G74 571 aa19.96■□□□□ 0.79
CLPP-201ENST00000245816 WRNIP1Q96S55 665 aa19.96■□□□□ 0.79
CLPP-201ENST00000245816 DDX4Q9NQI0 724 aaKnown RBP19.96■□□□□ 0.79
CLPP-201ENST00000245816 MYH2Q9UKX2 1941 aa19.96■□□□□ 0.79
CLPP-201ENST00000245816 IRF6O14896 467 aa19.95■□□□□ 0.78
CLPP-201ENST00000245816 ATP8B2P98198 1209 aa19.95■□□□□ 0.78
CLPP-201ENST00000245816 TBC1D9Q6ZT07 1266 aa19.95■□□□□ 0.78
CLPP-201ENST00000245816 GNL3LQ9NVN8 582 aaKnown RBP19.95■□□□□ 0.78
CLPP-201ENST00000245816 PDS5AQ29RF7 1337 aaKnown RBP19.95■□□□□ 0.78
CLPP-201ENST00000245816 CCL15-CCL14A0A0B4J2E2 113 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 WDHD1O75717 1129 aaPredicted RBP19.94■□□□□ 0.78
CLPP-201ENST00000245816 MLLT1Q03111 559 aaPredicted RBP19.94■□□□□ 0.78
CLPP-201ENST00000245816 MOGSQ13724 837 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 PDE3AQ14432 1141 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 CCL15Q16663 113 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 CD99L2Q8TCZ2 262 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 SSH3Q8TE77 659 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 FAM163AQ96GL9 167 aaPredicted RBP19.94■□□□□ 0.78
CLPP-201ENST00000245816 NEUROD6Q96NK8 337 aa19.94■□□□□ 0.78
CLPP-201ENST00000245816 RHBDL3P58872 404 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 MECOMQ03112 1051 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 FBXO46Q6PJ61 603 aaPredicted RBP19.93■□□□□ 0.78
CLPP-201ENST00000245816 IDI2Q9BXS1 227 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 TMOD2Q9NZR1 351 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 ABCF2Q9UG63 623 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 DDX19BQ9UMR2 479 aa19.93■□□□□ 0.78
CLPP-201ENST00000245816 ZSWIM8A7E2V4 1837 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 DDTLA6NHG4 134 aaPredicted RBP19.92■□□□□ 0.78
CLPP-201ENST00000245816 PHF20L1A8MW92 1017 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 ARID4AP29374 1257 aaPredicted RBP19.92■□□□□ 0.78
CLPP-201ENST00000245816 MCAMP43121 646 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 RGS3P49796 1198 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 MVPQ14764 893 aaKnown RBP19.92■□□□□ 0.78
CLPP-201ENST00000245816 PKN2Q16513 984 aaKnown RBP19.92■□□□□ 0.78
CLPP-201ENST00000245816 ERO1BQ86YB8 467 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 ZNF341Q9BYN7 854 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 AKAP2Q9Y2D5 859 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 CSADQ9Y600 493 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 BRCA2P51587 3418 aa19.92■□□□□ 0.78
CLPP-201ENST00000245816 BTBD19C9JJ37 291 aa19.91■□□□□ 0.78
CLPP-201ENST00000245816 GTF2A2P52657 109 aa19.91■□□□□ 0.78
CLPP-201ENST00000245816 BTDP43251 543 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 MAP3K10Q02779 954 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 PPIL2Q13356 520 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 SPATA5Q8NB90 893 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 NSUN4Q96CB9 384 aaKnown RBP19.9■□□□□ 0.78
CLPP-201ENST00000245816 DBNDD2Q9BQY9 259 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 TRIM17Q9Y577 477 aa19.9■□□□□ 0.78
CLPP-201ENST00000245816 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
CLPP-201ENST00000245816 GPR75-ASB3A0A0A6YYF3 556 aa19.89■□□□□ 0.77
CLPP-201ENST00000245816 G3BP1Q13283 466 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLPP-201ENST00000245816 TLR7Q9NYK1 1049 aaKnown RBP19.89■□□□□ 0.77
CLPP-201ENST00000245816 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.89■□□□□ 0.77
CLPP-201ENST00000245816 NOP58Q9Y2X3 529 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms