RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
SOX9-201ENST00000245479 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 HAUS7Q99871 368 aa13.21□□□□□ -0.29
SOX9-201ENST00000245479 GYG1P46976 350 aa13.21□□□□□ -0.3
SOX9-201ENST00000245479 CDR1P51861 262 aa13.21□□□□□ -0.3
SOX9-201ENST00000245479 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.3
SOX9-201ENST00000245479 CYP7A1P22680 504 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
SOX9-201ENST00000245479 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
SOX9-201ENST00000245479 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
SOX9-201ENST00000245479 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 TUBB4AP04350 444 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 SYCP1Q15431 976 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.3
SOX9-201ENST00000245479 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 SPTLC2O15270 562 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 NDUFA8P51970 172 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 NAP1L1P55209 391 aaKnown RBP13.2□□□□□ -0.3
SOX9-201ENST00000245479 GRAMD1CQ8IYS0 662 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 GOLGA1Q92805 767 aa13.2□□□□□ -0.3
SOX9-201ENST00000245479 ZBTB43O43298 467 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 AOX1Q06278 1338 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 F8W031 263 aaPredicted RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 PUF60Q9UHX1 559 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 KARSQ15046 597 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
SOX9-201ENST00000245479 DACH1Q9UI36 760 aa13.19□□□□□ -0.3
SOX9-201ENST00000245479 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 CASP1P29466 404 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 SYKP43405 635 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 PNOCQ13519 176 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
SOX9-201ENST00000245479 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
SOX9-201ENST00000245479 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
SOX9-201ENST00000245479 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 CDC25AP30304 524 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 MCAMP43121 646 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 ANKRD7Q92527 254 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
SOX9-201ENST00000245479 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
SOX9-201ENST00000245479 FOXO4P98177 505 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
SOX9-201ENST00000245479 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 KCNF1Q9H3M0 494 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
SOX9-201ENST00000245479 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
SOX9-201ENST00000245479 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 RHOXF2Q9BQY4 288 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 DHX58Q96C10 678 aa13.16□□□□□ -0.3
SOX9-201ENST00000245479 ZNF609O15014 1411 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 MARCH6O60337 910 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 NR5A1Q13285 461 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 MTX1Q13505 466 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 ST7Q9NRC1 585 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 G3V3G9 751 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 KCNQ2O43526 872 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 SLC5A1P13866 664 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
SOX9-201ENST00000245479 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 HINFPQ9BQA5 517 aa13.15□□□□□ -0.3
SOX9-201ENST00000245479 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms