RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SELENOOQ9BVL4 669 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 ENC1O14682 589 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 ARMT1Q9H993 441 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 RRP15Q9Y3B9 282 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 IKBKGQ9Y6K9 419 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 GOLGA6BA6NDN3 693 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 DDX39AO00148 427 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 TBC1D5Q92609 795 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 KRT86O43790 486 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 NAA35Q5VZE5 725 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 NOC4LQ9BVI4 516 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 TBCAO75347 108 aaKnown RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 NLRP12P59046 1061 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 C11orf57Q6ZUT1 292 aaPredicted RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 GCKP35557 465 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 VPS41P49754 854 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 SCAF11Q99590 1463 aaKnown RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 KIF5BP33176 963 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 LUC7L2Q9Y383 392 aaKnown RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.064e-7■■□□□ 12
RIF1-201ENST00000243326 WASLO00401 505 aaPredicted RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 GABPB1Q06547 395 aaPredicted RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 LETM2Q2VYF4 491 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 C6orf163Q5TEZ5 329 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 PPP1R21Q6ZMI0 780 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 KRT5P13647 590 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 CPSF2Q9P2I0 782 aaKnown RBP8.45□□□□□ -1.06
RIF1-201ENST00000243326 TYW1BQ6NUM6 668 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 STAMBPO95630 424 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 ZNF202O95125 648 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 NLRC4Q9NPP4 1024 aa8.45□□□□□ -1.06
RIF1-201ENST00000243326 STARD3NLO95772 234 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
RIF1-201ENST00000243326 IQCGQ9H095 443 aaKnown RBP8.44□□□□□ -1.06
RIF1-201ENST00000243326 LACTBP83111 547 aaPredicted RBP8.44□□□□□ -1.06
RIF1-201ENST00000243326 PDE4DQ08499 809 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 C8orf74Q6P047 294 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 SYNCQ9H7C4 482 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 MYO1AQ9UBC5 1043 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 GRM8O00222 908 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 SAMD15Q9P1V8 674 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 IFNAR2P48551 515 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 PHLDB2Q86SQ0 1253 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 MBD4O95243 580 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
RIF1-201ENST00000243326 ANO1Q5XXA6 986 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 PPM1EQ8WY54 764 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 HMG20BQ9P0W2 317 aa8.44□□□□□ -1.06
RIF1-201ENST00000243326 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.44□□□□□ -1.06
RIF1-201ENST00000243326 NELFBQ8WX92 580 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 THOC1Q96FV9 657 aaKnown RBP8.43□□□□□ -1.06
RIF1-201ENST00000243326 DZIP3Q86Y13 1208 aaKnown RBP8.43□□□□□ -1.06
RIF1-201ENST00000243326 CLIC4Q9Y696 253 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 MAGEB6P1A0A0J9YX57 407 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 MICAL1Q8TDZ2 1067 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 KCNH3Q9ULD8 1083 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 KIF14Q15058 1648 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 CCDC141Q6ZP82 1450 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 MAP2K2P36507 400 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 IDI1Q13907 227 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 ELP1O95163 1332 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 PPP1R13BQ96KQ4 1090 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 AMPD3Q01432 767 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 CCDC65Q8IXS2 484 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 ANKS4BQ8N8V4 417 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 CTAGE1Q96RT6 745 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 FAM207AQ9NSI2 230 aaPredicted RBP8.43□□□□□ -1.06
RIF1-201ENST00000243326 GRIN2BQ13224 1484 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 TBC1D8BQ0IIM8 1120 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 GKAP1Q5VSY0 366 aaPredicted RBP8.43□□□□□ -1.06
RIF1-201ENST00000243326 DAAM2Q86T65 1068 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 CXCR5P32302 372 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 VAV2P52735 878 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 RASAL2Q9UJF2 1139 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 V9GY48 417 aaPredicted RBP8.43□□□□□ -1.06
RIF1-201ENST00000243326 RDH13Q8NBN7 331 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
RIF1-201ENST00000243326 RAB3IL1Q8TBN0 382 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 CUL5Q93034 780 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TOPBP1Q92547 1522 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 FAM13AO94988 1023 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 ZYXQ15942 572 aaKnown RBP8.42□□□□□ -1.06
RIF1-201ENST00000243326 UNC5CLQ8IV45 518 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TPCN1Q9ULQ1 816 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TAF5LO75529 589 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 BAG2O95816 211 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 KRT83P78385 493 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms