RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 VIMP08670 466 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 SYT10Q6XYQ8 523 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ANKRD13DQ6ZTN6 518 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 IQCDQ96DY2 449 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
CSMD2-201ENST00000241312 SPOPO43791 374 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 SH3BP5O60239 455 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 SH2D4BQ5SQS7 431 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 CNNM4Q6P4Q7 775 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 ANKRD44Q8N8A2 993 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 PPP1R9BQ96SB3 815 aa7.56□□□□□ -1.2
CSMD2-201ENST00000241312 PLCD1P51178 756 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 LIN9Q5TKA1 542 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 NAA16Q6N069 864 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-201ENST00000241312 WAPLQ7Z5K2 1190 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 STX10O60499 249 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 MYCNP04198 464 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-201ENST00000241312 GKAP1Q5VSY0 366 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-201ENST00000241312 AOX1Q06278 1338 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 E7EVH7 732 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 CYP7A1P22680 504 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 CHPF2Q9P2E5 772 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 PHF8Q9UPP1 1060 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 RAPGEF1Q13905 1077 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 CCT6BQ92526 530 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 GPTP24298 496 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 KRBA2Q6ZNG9 492 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 PLCB1Q9NQ66 1216 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 KDM5BQ9UGL1 1544 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 GRM8O00222 908 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 ANXA1P04083 346 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 SMTNP53814 917 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 TRPC3Q13507 836 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 SYCE1Q8N0S2 351 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 FLOT1O75955 427 aa7.55□□□□□ -1.2
CSMD2-201ENST00000241312 DHX32Q7L7V1 743 aaKnown RBP7.55□□□□□ -1.2
CSMD2-201ENST00000241312 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
CSMD2-201ENST00000241312 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 PAK2Q13177 524 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 CCDC117Q8IWD4 279 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 TLDC2A0PJX2 215 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 ZNF853P0CG23 659 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 RABGAP1Q9Y3P9 1069 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 MCM7P33993 719 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 SLC8A3P57103 927 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 GEN1Q17RS7 908 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 DCAF17Q5H9S7 520 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 IFNL2Q8IZJ0 200 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 RAPGEF6Q8TEU7 1601 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 PARD3Q8TEW0 1356 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 GLT8D2Q9H1C3 349 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 NMIQ13287 307 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 RUFY3Q7L099 469 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 STMN1P16949 149 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 FBLN1P23142 703 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 RPGRIP1Q96KN7 1286 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 MYO9BQ13459 2157 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 C8orf34Q49A92 452 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 DENND2CQ68D51 928 aa7.54□□□□□ -1.2
CSMD2-201ENST00000241312 CCT6AP40227 531 aaKnown RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 RNF113AO15541 343 aaKnown RBP7.54□□□□□ -1.2
CSMD2-201ENST00000241312 PTPDC1A2A3K4 754 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 CREB3L3Q68CJ9 461 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 VPS52Q8N1B4 723 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 BCAP29Q9UHQ4 241 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 TRAF5O00463 557 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ITIH3Q06033 890 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 MAP3K21Q5TCX8 1036 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ELF2Q15723 593 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 HAUS3Q68CZ6 603 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 CCDC170Q8IYT3 715 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 UAP1Q16222 522 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 STK24Q9Y6E0 443 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 RASSF2P50749 326 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 IMPACTQ9P2X3 320 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 AK2P54819 239 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 SDCCAG8Q86SQ7 713 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 FAM204AQ9H8W3 233 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 DUOX2Q9NRD8 1548 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 MSH6P52701 1360 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 PPFIA4O75335 1185 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 MYRIPQ8NFW9 859 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 SECISBP2LQ93073 1101 aaKnown RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 PPP1R12CQ9BZL4 782 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 RABEP2Q9H5N1 569 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ZRANB1Q9UGI0 708 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ZNF131P52739 623 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 BIRC3Q13489 604 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms