RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 EP400Q96L91 3159 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 GRAPQ13588 217 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 MPHOSPH10O00566 681 aaKnown RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 MECOMQ03112 1051 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 SF3B3Q15393 1217 aaKnown RBP13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 PKNOX2Q96KN3 472 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
PCDHB12-201ENST00000239450 CARMIL3Q8ND23 1372 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 TRIM22Q8IYM9 498 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 GPSM2P81274 684 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 VAT1LQ9HCJ6 419 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
PCDHB12-201ENST00000239450 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 CYP2D6P10635 497 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 CHRNA5P30532 468 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ZNF396Q96N95 335 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 MTMR6Q9Y217 621 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 BECN2A8MW95 431 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 BAG3O95817 575 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 UBE2HP62256 183 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 AIFM3Q96NN9 605 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 NUP62CLQ9H1M0 184 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 TMEM63CQ9P1W3 806 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 COL16A1Q07092 1604 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 RIC1Q4ADV7 1423 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 PPARAQ07869 468 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 GPT2Q8TD30 523 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ESR2Q92731 530 aa13.62□□□□□ -0.23
PCDHB12-201ENST00000239450 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 AKNAD1Q5T1N1 836 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 XDHP47989 1333 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 FGFR2P21802 821 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 CYB5R4Q7L1T6 521 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 KIAA0825Q8IV33 1275 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 NEDD4P46934 1319 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 TCP10Q12799 353 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 ADGRA1Q86SQ6 560 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 TEX11Q8IYF3 940 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 KRT23Q9C075 422 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
PCDHB12-201ENST00000239450 H0YIN7 160 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 CDKL5O76039 1030 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 CCDC183Q5T5S1 534 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 GNAT2P19087 354 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 DDR1Q08345 913 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 RTN1Q16799 776 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
PCDHB12-201ENST00000239450 HOMER1Q86YM7 354 aa13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 GSG1L2A8MUP6 293 aa13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
PCDHB12-201ENST00000239450 DACT1Q9NYF0 836 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms