RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 RANBP6O60518 1105 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 MMP14P50281 582 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 MFSD6Q6ZSS7 791 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 SGSM2O43147 1006 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 UBAC1Q9BSL1 405 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
TNFAIP3-201ENST00000237289 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 DPF2Q92785 391 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 PNMA8AQ86V59 439 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 DAGLAQ9Y4D2 1042 aa13.19□□□□□ -0.3
TNFAIP3-201ENST00000237289 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 IQCA1Q86XH1 822 aa13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-201ENST00000237289 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 USP17L12C9JPN9 530 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 USP17L21D6R901 530 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 CACNB3P54284 484 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 M0R2C6 588 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 EPHX2P34913 555 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 PRKG1Q13976 671 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 DCAF15Q66K64 600 aa13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-201ENST00000237289 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 HSPD1P10809 573 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 KRT23Q9C075 422 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 FZD9O00144 591 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 ESR2Q92731 530 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 CSRNP1Q96S65 589 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
TNFAIP3-201ENST00000237289 PRKAB2O43741 272 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 MYH3P11055 1940 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 NEK4P51957 841 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 EPS15P42566 896 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 ZDHHC15Q96MV8 337 aa13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNFAIP3-201ENST00000237289 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 FEZ1Q99689 392 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 PRMT6Q96LA8 375 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 ZNF70Q9UC06 446 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 CASTP20810 708 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 CDC42EP5Q6NZY7 148 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 COL24A1Q17RW2 1714 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 FGAP02671 866 aa13.14□□□□□ -0.31
TNFAIP3-201ENST00000237289 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms