RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 EPHB4P54760 987 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 LAMB3Q13751 1172 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 FLOT1O75955 427 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 ZNF202O95125 648 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 USH1CQ9Y6N9 552 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 NLRP1Q9C000 1473 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 SGSM2O43147 1006 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 SLC35F6Q8N357 371 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 TCOF1Q13428 1488 aaKnown RBP14.42□□□□□ -0.1
VAMP4-201ENST00000236192 CUTAO60888 179 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 TPCN1Q9ULQ1 816 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 SNAPC4Q5SXM2 1469 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 F6X3S4 739 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 MYO1FO00160 1098 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 UBXN1Q04323 297 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 SDCCAG8Q86SQ7 713 aaPredicted RBP14.42□□□□□ -0.1
VAMP4-201ENST00000236192 CROCCP2Q86T23 111 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 MTIF2P46199 727 aaKnown RBP14.42□□□□□ -0.1
VAMP4-201ENST00000236192 PLCB4Q15147 1175 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 RHPN1Q8TCX5 695 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 P3H4Q92791 437 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 IKBKBO14920 756 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 TTC39AQ5SRH9 613 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 MLKLQ8NB16 471 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 PYM1Q9BRP8 204 aaKnown RBP14.42□□□□□ -0.1
VAMP4-201ENST00000236192 LLPHQ9BRT6 129 aaKnown RBP14.42□□□□□ -0.1
VAMP4-201ENST00000236192 FUT8Q9BYC5 575 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 TM6SF1Q9BZW5 370 aa14.42□□□□□ -0.1
VAMP4-201ENST00000236192 PTPDC1A2A3K4 754 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 EIF3HO15372 352 aaKnown RBP eCLIP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 ACBD5Q5T8D3 534 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 FAM43BQ6ZT52 329 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 HNRNPLLQ8WVV9 542 aaKnown RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 ABTB1Q969K4 478 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 KIF24Q5T7B8 1368 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 TLDC2A0PJX2 215 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 GOLGA8BA8MQT2 603 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 SLC8A3P57103 927 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 PDCLQ13371 301 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 NAA16Q6N069 864 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 RMND1Q9NWS8 449 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 RPS6KB1P23443 525 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 RRAGBQ5VZM2 374 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 PHLDB2Q86SQ0 1253 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 VSIG1Q86XK7 387 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 PLCB1Q9NQ66 1216 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 NR1D1P20393 614 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 RASSF2P50749 326 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 AIDAQ96BJ3 306 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 HOOK2Q96ED9 719 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 THOC1Q96FV9 657 aaKnown RBP14.41□□□□□ -0.1
VAMP4-201ENST00000236192 BOLA2Q9H3K6 86 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 RASAL2Q9UJF2 1139 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 NFE2L3Q9Y4A8 694 aa14.41□□□□□ -0.1
VAMP4-201ENST00000236192 ADALQ6DHV7 355 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 ME3Q16798 604 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 ARMCX6Q7L4S7 300 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 G3BP2Q9UN86 482 aaKnown RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 FGFR1OPO95684 399 aaKnown RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 KIAA0753Q2KHM9 967 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 CCDC43Q96MW1 224 aaKnown RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 NAP1L3Q99457 506 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 ZNF446Q9NWS9 450 aa14.4□□□□□ -0.1
VAMP4-201ENST00000236192 PAIP2BQ9ULR5 123 aaKnown RBP14.4□□□□□ -0.1
VAMP4-201ENST00000236192 STXBP3O00186 592 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 AIMP1Q12904 312 aaKnown RBP14.39□□□□□ -0.11
VAMP4-201ENST00000236192 VSTM4Q8IW00 320 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 TEX9Q8N6V9 391 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 KAT14Q9H8E8 782 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 A0A1W2PRG0 241 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 VPS36Q86VN1 386 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 APLFQ8IW19 511 aaPredicted RBP14.39□□□□□ -0.11
VAMP4-201ENST00000236192 CDK5RAP3Q96JB5 506 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 HAUS4Q9H6D7 363 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 CTNNA1P35221 906 aaKnown RBP14.39□□□□□ -0.11
VAMP4-201ENST00000236192 MAP7D1Q3KQU3 841 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 TAOK1Q7L7X3 1001 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
VAMP4-201ENST00000236192 ATP5DP30049 168 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 SLC40A1Q9NP59 571 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 PDE6BP35913 854 aa14.38□□□□□ -0.11
VAMP4-201ENST00000236192 KLHL23Q8NBE8 558 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms