RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 TSGA10IPQ3SY00 556 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 PSMD1Q99460 953 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 BCS1LQ9Y276 419 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 SLC4A4Q9Y6R1 1079 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 COL4A5P29400 1685 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 F8W031 263 aaPredicted RBP12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 SDR42E1Q8WUS8 393 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 LARP6Q9BRS8 491 aaKnown RBP12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 MAST2Q6P0Q8 1798 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 TERF1P54274 439 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 ALX1Q15699 326 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 TM6SF1Q9BZW5 370 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 INCENPQ9NQS7 918 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
PRAMEF4-201ENST00000235349 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 E7EWF7 191 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 DDIT3P35638 169 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 TTC14Q96N46 770 aa12.03□□□□□ -0.48
PRAMEF4-201ENST00000235349 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 RPAP1Q9BWH6 1393 aaPredicted RBP12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 ST18O60284 1047 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 SCNN1DP51172 638 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 DACT2Q5SW24 774 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 RUFY3Q7L099 469 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.48
PRAMEF4-201ENST00000235349 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 ESPNB1AK53 854 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 NFKBIEO00221 500 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 ZNF213O14771 459 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 LDHCP07864 332 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 GNAT2P19087 354 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 PRELPP51888 382 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 PPP4CP60510 307 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 GSTO1P78417 241 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 EVX2Q03828 476 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 IMMTQ16891 758 aaKnown RBP12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 NEK1Q96PY6 1258 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 TTF2Q9UNY4 1162 aaKnown RBP12.02□□□□□ -0.49
PRAMEF4-201ENST00000235349 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 PSME4Q14997 1843 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 CYP2D7A0A087X1C5 515 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 RAD17O75943 681 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 PSMA5P28066 241 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 AK2P54819 239 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 TBC1D10CQ8IV04 446 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 STK11IPQ8N1F8 1099 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 NAPBQ9H115 298 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 PCDHAC2Q9Y5I4 1007 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
PRAMEF4-201ENST00000235349 GPR75-ASB3A0A0A6YYF3 556 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
PRAMEF4-201ENST00000235349 BTDP43251 543 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 TDO2P48775 406 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 KRT32Q14532 448 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 CHST3Q7LGC8 479 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 KIAA0825Q8IV33 1275 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
PRAMEF4-201ENST00000235349 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
PRAMEF4-201ENST00000235349 DAGLAQ9Y4D2 1042 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 MINDY4BA8MYZ0 360 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 RASSF7Q02833 373 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 TMED8Q6PL24 325 aaPredicted RBP12□□□□□ -0.49
PRAMEF4-201ENST00000235349 TMX3Q96JJ7 454 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 MAP7D2Q96T17 732 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 NACAP1Q9BZK3 213 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
PRAMEF4-201ENST00000235349 DCP1AQ9NPI6 582 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms