RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ATP6V0A2Q9Y487 856 aa15.04■□□□□ -0
NEK4-201ENST00000233027 ARL1P40616 181 aaPredicted RBP15.04■□□□□ -0
NEK4-201ENST00000233027 PDE4DQ08499 809 aa15.04■□□□□ -0
NEK4-201ENST00000233027 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
NEK4-201ENST00000233027 A0A1B0GUL7 405 aa15.04■□□□□ -0
NEK4-201ENST00000233027 SV2BQ7L1I2 683 aa15.04■□□□□ -0
NEK4-201ENST00000233027 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
NEK4-201ENST00000233027 SYNRGQ9UMZ2 1314 aa15.04■□□□□ -0
NEK4-201ENST00000233027 RIMBP2O15034 1052 aa15.04■□□□□ -0
NEK4-201ENST00000233027 HOXC9P31274 260 aa15.04■□□□□ -0
NEK4-201ENST00000233027 ZNF594Q96JF6 807 aaPredicted RBP15.04■□□□□ -0
NEK4-201ENST00000233027 TTC14Q96N46 770 aa15.04■□□□□ -0
NEK4-201ENST00000233027 DBNDD2Q9BQY9 259 aa15.04■□□□□ -0
NEK4-201ENST00000233027 TCHPQ9BT92 498 aa15.04■□□□□ -0
NEK4-201ENST00000233027 MYL10Q9BUA6 226 aa15.04■□□□□ -0
NEK4-201ENST00000233027 PKD2L1Q9P0L9 805 aa15.04■□□□□ -0
NEK4-201ENST00000233027 ATL3Q6DD88 541 aa15.04■□□□□ -0
NEK4-201ENST00000233027 SAMD15Q9P1V8 674 aa15.04■□□□□ -0
NEK4-201ENST00000233027 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
NEK4-201ENST00000233027 TRAF5O00463 557 aa15.03■□□□□ -0
NEK4-201ENST00000233027 ATP2A1O14983 1001 aa15.03■□□□□ -0
NEK4-201ENST00000233027 UTP14CQ5TAP6 766 aaKnown RBP15.03■□□□□ -0
NEK4-201ENST00000233027 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
NEK4-201ENST00000233027 SEC62Q99442 399 aaKnown RBP15.03■□□□□ -0
NEK4-201ENST00000233027 ERCC3P19447 782 aa15.03■□□□□ -0
NEK4-201ENST00000233027 ZNF445P59923 1031 aa15.03■□□□□ -0
NEK4-201ENST00000233027 PER1O15534 1290 aaPredicted RBP15.03■□□□□ -0
NEK4-201ENST00000233027 GNA11P29992 359 aa15.03■□□□□ -0
NEK4-201ENST00000233027 TBC1D8BQ0IIM8 1120 aa15.03■□□□□ -0
NEK4-201ENST00000233027 CYP26C1Q6V0L0 522 aa15.03■□□□□ -0
NEK4-201ENST00000233027 TUBB4BP68371 445 aa15.03■□□□□ -0
NEK4-201ENST00000233027 MYRIPQ8NFW9 859 aa15.03■□□□□ -0
NEK4-201ENST00000233027 JAKMIP2Q96AA8 810 aa15.03■□□□□ -0
NEK4-201ENST00000233027 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
NEK4-201ENST00000233027 CCNT1O60563 726 aaKnown RBP15.03■□□□□ -0
NEK4-201ENST00000233027 PARP1P09874 1014 aaKnown RBP15.03■□□□□ -0
NEK4-201ENST00000233027 SPATA24Q86W54 205 aa15.03■□□□□ -0
NEK4-201ENST00000233027 MTRF1LQ9UGC7 380 aaKnown RBP15.03■□□□□ -0
NEK4-201ENST00000233027 JAK2O60674 1132 aa15.02■□□□□ -0
NEK4-201ENST00000233027 SP4Q02446 784 aa15.02■□□□□ -0
NEK4-201ENST00000233027 HS2ST1Q7LGA3 356 aa15.02■□□□□ -0
NEK4-201ENST00000233027 SMC6Q96SB8 1091 aa15.02■□□□□ -0
NEK4-201ENST00000233027 TRIM35Q9UPQ4 493 aa15.02■□□□□ -0
NEK4-201ENST00000233027 PLCH2O75038 1416 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 NLRP12P59046 1061 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 FAM89AQ96GI7 184 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 CTDSPL2Q05D32 466 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 PHKBQ93100 1093 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 MRRFQ96E11 262 aaKnown RBP15.02□□□□□ -0.01
NEK4-201ENST00000233027 GPCPD1Q9NPB8 672 aa15.02□□□□□ -0.01
NEK4-201ENST00000233027 WDHD1O75717 1129 aaPredicted RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 ZNF202O95125 648 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 SEL1L2Q5TEA6 688 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 RASSF4Q9H2L5 321 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 VIMP08670 466 aaKnown RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 UIMC1Q96RL1 719 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 SGSM2O43147 1006 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 KRT5P13647 590 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 VEZTQ9HBM0 779 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 FAM170AA1A519 330 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 DEXIO95424 95 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 ATP10BO94823 1461 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 UAP1Q16222 522 aaPredicted RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 C8orf74Q6P047 294 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 PAXIP1Q6ZW49 1069 aaPredicted RBP15.01□□□□□ -0.01
NEK4-201ENST00000233027 PSMB7Q99436 277 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 USP19O94966 1318 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 A2MP01023 1474 aa15.01□□□□□ -0.01
NEK4-201ENST00000233027 EIF6P56537 245 aaKnown RBP15□□□□□ -0.01
NEK4-201ENST00000233027 MTX1Q13505 466 aa15□□□□□ -0.01
NEK4-201ENST00000233027 RILPL1Q5EBL4 403 aa15□□□□□ -0.01
NEK4-201ENST00000233027 TSC1Q92574 1164 aa15□□□□□ -0.01
NEK4-201ENST00000233027 XAGE2Q96GT9 111 aa15□□□□□ -0.01
NEK4-201ENST00000233027 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
NEK4-201ENST00000233027 CCDC65Q8IXS2 484 aa15□□□□□ -0.01
NEK4-201ENST00000233027 TAB2Q9NYJ8 693 aa15□□□□□ -0.01
NEK4-201ENST00000233027 CHMP2AO43633 222 aa15□□□□□ -0.01
NEK4-201ENST00000233027 ITGA6P23229 1130 aa15□□□□□ -0.01
NEK4-201ENST00000233027 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
NEK4-201ENST00000233027 NSFL1CQ9UNZ2 370 aaKnown RBP15□□□□□ -0.01
NEK4-201ENST00000233027 IL2RBP14784 551 aa15□□□□□ -0.01
NEK4-201ENST00000233027 CALCOCO2Q13137 446 aa15□□□□□ -0.01
NEK4-201ENST00000233027 BEND3Q5T5X7 828 aa15□□□□□ -0.01
NEK4-201ENST00000233027 TTF2Q9UNY4 1162 aaKnown RBP15□□□□□ -0.01
NEK4-201ENST00000233027 PABPN1LA6NDY0 278 aaKnown RBP15□□□□□ -0.01
NEK4-201ENST00000233027 TRMT44Q8IYL2 757 aaKnown RBP15□□□□□ -0.01
NEK4-201ENST00000233027 ARFGAP2Q8N6H7 521 aa15□□□□□ -0.01
NEK4-201ENST00000233027 EPB41P11171 864 aaKnown RBP14.99□□□□□ -0.01
NEK4-201ENST00000233027 PAK1Q13153 545 aa14.99□□□□□ -0.01
NEK4-201ENST00000233027 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
NEK4-201ENST00000233027 LLPHQ9BRT6 129 aaKnown RBP14.99□□□□□ -0.01
NEK4-201ENST00000233027 MAP3K19Q56UN5 1328 aa14.99□□□□□ -0.01
NEK4-201ENST00000233027 PSMC4P43686 418 aa14.99□□□□□ -0.01
NEK4-201ENST00000233027 SF3A3Q12874 501 aaKnown RBP eCLIP14.99□□□□□ -0.01
NEK4-201ENST00000233027 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms