RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 HHATQ5VTY9 493 aa13.08□□□□□ -0.31
PCDH12-201ENST00000231484 BRD1O95696 1058 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 CLCN6P51797 869 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 SESN3P58005 492 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 MAP3K12Q12852 859 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 SAMM50Q9Y512 469 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 TMED1Q13445 227 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 DENND2CQ68D51 928 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 DCTPP1Q9H773 170 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 TAF11Q15544 211 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 DAPK1P53355 1430 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 TRIM75PA6NK02 468 aa13.08□□□□□ -0.32
PCDH12-201ENST00000231484 EIF3CLB5ME19 914 aaKnown RBP13.08□□□□□ -0.32
PCDH12-201ENST00000231484 EIF3CQ99613 913 aaKnown RBP13.08□□□□□ -0.32
PCDH12-201ENST00000231484 CHUKO15111 745 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
PCDH12-201ENST00000231484 CHMLP26374 656 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 TTC19Q6DKK2 380 aaPredicted RBP13.07□□□□□ -0.32
PCDH12-201ENST00000231484 KLHL7Q8IXQ5 586 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 NUP58Q9BVL2 599 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 CLUL1Q15846 466 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 RNASE9P60153 205 aaKnown RBP13.07□□□□□ -0.32
PCDH12-201ENST00000231484 SYNRGQ9UMZ2 1314 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 VPS16Q9H269 839 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
PCDH12-201ENST00000231484 RGS16O15492 202 aaPredicted RBP13.07□□□□□ -0.32
PCDH12-201ENST00000231484 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
PCDH12-201ENST00000231484 C9orf84Q5VXU9 1444 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
PCDH12-201ENST00000231484 ANKRD20A3Q5VUR7 823 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 SRGAP1Q7Z6B7 1085 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 MLKLQ8NB16 471 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 RANBP1P43487 201 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
PCDH12-201ENST00000231484 ZBTB40Q9NUA8 1239 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 BCAP29Q9UHQ4 241 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 COMMD10Q9Y6G5 202 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 ARMC2Q8NEN0 867 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 CEP104O60308 925 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 STX2P32856 288 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 HSPA1LP34931 641 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 FBXO38Q6PIJ6 1188 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 MFSD6Q6ZSS7 791 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
PCDH12-201ENST00000231484 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
PCDH12-201ENST00000231484 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 DYNC1I2Q13409 638 aaKnown RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 SLMAPQ14BN4 828 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MEIS3Q99687 375 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MKNK2Q9HBH9 465 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 DNAJC8O75937 253 aaPredicted RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 PRR16Q569H4 304 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 KLHDC4Q8TBB5 520 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 TCP11Q8WWU5 503 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 TRIM31Q9BZY9 425 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MCM7P33993 719 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 MGARPQ8TDB4 240 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 NOC4LQ9BVI4 516 aaKnown RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 HOMER3Q9NSC5 361 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 HDAC9Q9UKV0 1011 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 CCHCR1Q8TD31 782 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 BAG2O95816 211 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
PCDH12-201ENST00000231484 RTN1Q16799 776 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
PCDH12-201ENST00000231484 TBC1D8BQ0IIM8 1120 aa13.04□□□□□ -0.32
PCDH12-201ENST00000231484 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
PCDH12-201ENST00000231484 GJC1P36383 396 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms