RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC122Q5T0U0 273 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-201ENST00000230538 CFAP157Q5JU67 520 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
LAMA4-201ENST00000230538 SAMD15Q9P1V8 674 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-201ENST00000230538 EBAG9O00559 213 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 MYL5Q02045 173 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 NOC4LQ9BVI4 516 aaKnown RBP12.97□□□□□ -0.33
LAMA4-201ENST00000230538 SNX16P57768 344 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 ALDH3A1P30838 453 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 WDR44Q5JSH3 913 aa12.97□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-201ENST00000230538 KIFAP3Q92845 792 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 ZMYND15Q9H091 742 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 PKD2L1Q9P0L9 805 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 TRAF5O00463 557 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 PLCD1P51178 756 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 SETDB1Q15047 1291 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 ARFGAP2Q8N6H7 521 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 PHACTR3Q96KR7 559 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 RPS6KB1P23443 525 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 TPD52P55327 224 aaPredicted RBP12.96□□□□□ -0.33
LAMA4-201ENST00000230538 TAF12Q16514 161 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
LAMA4-201ENST00000230538 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
LAMA4-201ENST00000230538 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.34
LAMA4-201ENST00000230538 PPP1R2P41236 205 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 FNBP1Q96RU3 617 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 GAS8O95995 478 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 HDXQ7Z353 690 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 TTC6Q86TZ1 520 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 RBSNQ9H1K0 784 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.34
LAMA4-201ENST00000230538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.96□□□□□ -0.34
LAMA4-201ENST00000230538 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-201ENST00000230538 BIRC3Q13489 604 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 FAM160A1Q05DH4 1040 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 PDE4DQ08499 809 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 SLC27A2O14975 620 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
LAMA4-201ENST00000230538 HS1BP3Q53T59 392 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 NAP1L3Q99457 506 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-201ENST00000230538 SH2D4AQ9H788 454 aa12.95□□□□□ -0.34
LAMA4-201ENST00000230538 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 TUBBP07437 444 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 HARSP12081 509 aaKnown RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 UAP1Q16222 522 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 INF2Q27J81 1249 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 VWA3BQ502W6 1294 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 B4E1Z4 1266 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 CNNM4Q6P4Q7 775 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 TEX11Q8IYF3 940 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 PIK3C2GO75747 1445 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 DEXIO95424 95 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 ATP5DP30049 168 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 TRIM14Q14142 442 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 CHMP2AO43633 222 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 CALUO43852 315 aaPredicted RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 STX10O60499 249 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 KRT9P35527 623 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 GPR161Q8N6U8 529 aaKnown RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 SPOPO43791 374 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 NOL3O60936 208 aaKnown RBP12.94□□□□□ -0.34
LAMA4-201ENST00000230538 ZWINTO95229 277 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 IGSF22Q8N9C0 903 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
LAMA4-201ENST00000230538 NPATQ14207 1427 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 RILPL1Q5EBL4 403 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 G2E3Q7L622 706 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 VPS16Q9H269 839 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
LAMA4-201ENST00000230538 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
LAMA4-201ENST00000230538 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms