RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 COL18A1P39060 1754 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 TRPM3Q9HCF6 1732 aaPredicted RBP6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 CCDC172P0C7W6 258 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 WDR66Q8TBY9 1149 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 EPSTI1Q96J88 318 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 FAM107BQ9H098 131 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 USP25Q9UHP3 1055 aa6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 WDR33Q9C0J8 1336 aaKnown RBP6.73□□□□□ -1.33
PPFIBP1-201ENST00000228425 SPDYE2BA6NHP3 402 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 SPDYE5A6NIY4 337 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 SPDYE6P0CI01 402 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 PSMC1P62191 440 aaKnown RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 IDI1Q13907 227 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 SPDYE2Q495Y8 402 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CFAP157Q5JU67 520 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 NBPF14Q5TI25 921 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 TCERG1LQ5VWI1 586 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 SULT6B1Q6IMI4 303 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 TMC2Q8TDI7 906 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 SNX21Q969T3 373 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 UPF3BQ9BZI7 483 aaKnown RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 MAP3K20Q9NYL2 800 aaKnown RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 ATP2C2O75185 946 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 KCNH5Q8NCM2 988 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CCDC110Q8TBZ0 833 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 PCDHB15Q9Y5E8 787 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 PPFIA4O75335 1185 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 KCNA6P17658 529 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 NLRP6P59044 892 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 GEN1Q17RS7 908 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 TBC1D5Q92609 795 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 NSRP1Q9H0G5 558 aaKnown RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 NCKAP5LQ9HCH0 1330 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 GABPAQ06546 454 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CCDC40Q4G0X9 1142 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CWC25Q9NXE8 425 aaPredicted RBP6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CALCOCO1Q9P1Z2 691 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 RIMS2Q9UQ26 1411 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 MAATS1Q7Z4T9 603 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 CCDC83Q8IWF9 413 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 TTC30BQ8N4P2 665 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 MSANTD4Q8NCY6 345 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 C19orf44Q9H6X5 657 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 ABCF2Q9UG63 623 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 NOD1Q9Y239 953 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 MYOM2P54296 1465 aa6.72□□□□□ -1.33
PPFIBP1-201ENST00000228425 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 ATP2B3Q16720 1220 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 KIAA0753Q2KHM9 967 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 FBXO41Q8TF61 875 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 IWS1Q96ST2 819 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 AS3MTQ9HBK9 375 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 ARHGEF10LQ9HCE6 1279 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 NPHP4O75161 1426 aaPredicted RBP6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 YEATS2Q9ULM3 1422 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 CKAP4Q07065 602 aaKnown RBP6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 MAP7Q14244 749 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 MFSD4BQ5TF39 518 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 KCNB2Q92953 911 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 SLC4A7Q9Y6M7 1214 aa6.71□□□□□ -1.33
PPFIBP1-201ENST00000228425 POM121CA8CG34 1229 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 CHRM1P11229 460 aaPredicted RBP6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 HSPA2P54652 639 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 KRT85P78386 507 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 SARNPP82979 210 aaKnown RBP6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 ABTB2Q8N961 1025 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 GTF3C6Q969F1 213 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 CALML4Q96GE6 196 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 SIL1Q9H173 461 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 ITM2BQ9Y287 266 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 ATP2A1O14983 1001 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 ZSCAN12O43309 604 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 HIP1RO75146 1068 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 STMN1P16949 149 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 AMPD3Q01432 767 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 CDR2Q01850 454 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 CFAP100Q494V2 611 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 DDX27Q96GQ7 796 aaKnown RBP6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 DLC1Q96QB1 1528 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 A0A087WZG4 1122 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 YEATS4O95619 227 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 ALDH3A1P30838 453 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 SEMA3FQ13275 785 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 MCM10Q7L590 875 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 CCDC77Q9BR77 488 aa6.71□□□□□ -1.34
PPFIBP1-201ENST00000228425 PTPRCP08575 1304 aa6.7□□□□□ -1.34
PPFIBP1-201ENST00000228425 SLC26A4O43511 780 aa6.7□□□□□ -1.34
PPFIBP1-201ENST00000228425 MGEA5O60502 916 aa6.7□□□□□ -1.34
PPFIBP1-201ENST00000228425 IDH1O75874 414 aaKnown RBP6.7□□□□□ -1.34
PPFIBP1-201ENST00000228425 CTCFLQ8NI51 663 aaPredicted RBP6.7□□□□□ -1.34
PPFIBP1-201ENST00000228425 DNAAF4Q8WXU2 420 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms