RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
SF1-201ENST00000227503 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
SF1-201ENST00000227503 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
SF1-201ENST00000227503 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
SF1-201ENST00000227503 ADKP55263 362 aaKnown RBP16.22■□□□□ 0.19
SF1-201ENST00000227503 CABLES1Q8TDN4 633 aa16.22■□□□□ 0.19
SF1-201ENST00000227503 SECISBP2LQ93073 1101 aaKnown RBP16.22■□□□□ 0.19
SF1-201ENST00000227503 LLPHQ9BRT6 129 aaKnown RBP16.22■□□□□ 0.19
SF1-201ENST00000227503 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 LEKR1Q6ZMV7 388 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 GPR161Q8N6U8 529 aaKnown RBP16.21■□□□□ 0.19
SF1-201ENST00000227503 EXOC4Q96A65 974 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
SF1-201ENST00000227503 MTF1Q14872 753 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 STK38Q15208 465 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
SF1-201ENST00000227503 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
SF1-201ENST00000227503 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
SF1-201ENST00000227503 TMEM94Q12767 1356 aa16.21■□□□□ 0.18
SF1-201ENST00000227503 GOLIM4O00461 696 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 MARCKSP29966 332 aaPredicted RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 MAP3K9P80192 1104 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 MRFAP1Q9Y605 127 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 TTC31Q49AM3 519 aaPredicted RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 PNKPQ96T60 521 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 TIMM10P62072 90 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
SF1-201ENST00000227503 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
SF1-201ENST00000227503 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 ZNF202O95125 648 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
SF1-201ENST00000227503 NAA16Q6N069 864 aaPredicted RBP16.19■□□□□ 0.18
SF1-201ENST00000227503 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 SRRTQ9BXP5 876 aaKnown RBP16.19■□□□□ 0.18
SF1-201ENST00000227503 LZTFL1Q9NQ48 299 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 TMEM139Q8IV31 216 aa16.19■□□□□ 0.18
SF1-201ENST00000227503 RHOXF2BP0C7M4 288 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 NLRP12P59046 1061 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 RHOXF2Q9BQY4 288 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 FANCLQ9NW38 375 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 IL15P40933 162 aaPredicted RBP16.18■□□□□ 0.18
SF1-201ENST00000227503 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
SF1-201ENST00000227503 INTS13Q9NVM9 706 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
SF1-201ENST00000227503 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
SF1-201ENST00000227503 A0A1B0GUL7 405 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 ATP8B1O43520 1251 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
SF1-201ENST00000227503 PNOCQ13519 176 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 TJP1Q07157 1748 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 E7EWF7 191 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 TPM1P09493 284 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 LRRC24Q50LG9 513 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 ADALQ6DHV7 355 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SF1-201ENST00000227503 MAST3O60307 1309 aa16.17■□□□□ 0.18
SF1-201ENST00000227503 TXLNAP40222 546 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 KCNJ6P48051 423 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 LINC00301Q8NCQ3 95 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 RABEP2Q9H5N1 569 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 ANKZF1Q9H8Y5 726 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
SF1-201ENST00000227503 EYA2O00167 538 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 PFKFB1P16118 471 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 ATF3P18847 181 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 GOLGA6L1Q8N7Z2 621 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 RABGGTAQ92696 567 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 BAG1Q99933 345 aaPredicted RBP16.16■□□□□ 0.18
SF1-201ENST00000227503 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 ZSCAN12O43309 604 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 FDPSP14324 419 aaKnown RBP16.16■□□□□ 0.18
SF1-201ENST00000227503 EP400NLQ6ZTU2 488 aa16.16■□□□□ 0.18
SF1-201ENST00000227503 ZNF594Q96JF6 807 aaPredicted RBP16.16■□□□□ 0.18
SF1-201ENST00000227503 MAP2K7O14733 419 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SF1-201ENST00000227503 VSTM4Q8IW00 320 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms