RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLIP2-201ENST00000223398 LOC102724428A0A0B4J2F2 783 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 RXRBP28702 533 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
CLIP2-201ENST00000223398 SIK1P57059 783 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 CTAGE1Q96RT6 745 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 FERMT1Q9BQL6 677 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 MAEAQ7L5Y9 396 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 KIAA0825Q8IV33 1275 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 TAOK3Q9H2K8 898 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
CLIP2-201ENST00000223398 GOLGA6L7A0A1B0GV03 622 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 hCG_1642624A0A1W2PR95 340 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 NOP56O00567 594 aaKnown RBP20.88■□□□□ 0.93
CLIP2-201ENST00000223398 RPS6KB1P23443 525 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 UBE4AQ14139 1066 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 EDC3Q96F86 508 aaKnown RBP20.88■□□□□ 0.93
CLIP2-201ENST00000223398 SNW1Q13573 536 aaKnown RBP20.88■□□□□ 0.93
CLIP2-201ENST00000223398 C8orf34Q49A92 452 aa20.88■□□□□ 0.93
CLIP2-201ENST00000223398 PTPRTO14522 1441 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 CCDC169A6NNP5 214 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 NEMFO60524 1076 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 MAP9Q49MG5 647 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 DCAF17Q5H9S7 520 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-201ENST00000223398 SMCR8Q8TEV9 937 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-201ENST00000223398 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-201ENST00000223398 TCP10L2B9ZVM9 353 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
CLIP2-201ENST00000223398 KBTBD3Q8NAB2 608 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
CLIP2-201ENST00000223398 TMEM87BQ96K49 555 aa20.87■□□□□ 0.93
CLIP2-201ENST00000223398 ZBED4O75132 1171 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 TXKP42681 527 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 IRX3P78415 501 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 MAP2K1Q02750 393 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 SPAG1Q07617 926 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 OTUD7BQ6GQQ9 843 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 WDR70Q9NW82 654 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 CFBP00751 764 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 KIFC2Q96AC6 838 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 HOOK2Q96ED9 719 aa20.86■□□□□ 0.93
CLIP2-201ENST00000223398 ZNF830Q96NB3 372 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 ANGEL1Q9UNK9 670 aaKnown RBP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLIP2-201ENST00000223398 TERF1P54274 439 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 TFAP4Q01664 338 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 PDCL2Q8N4E4 241 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 TBC1D22AQ8WUA7 517 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 DEXIO95424 95 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 IQUBQ8NA54 791 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 TSPOAP1O95153 1857 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 ADGRL2O95490 1459 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 BCAMP50895 628 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-201ENST00000223398 A0A1B0GVL5 298 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 NCAPH2Q6IBW4 605 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 DPY19L2Q6NUT2 758 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 SV2BQ7L1I2 683 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 PAGR1Q9BTK6 254 aa20.85■□□□□ 0.93
CLIP2-201ENST00000223398 ZNF335Q9H4Z2 1342 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-201ENST00000223398 CAVIN2O95810 425 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 CYLC1P35663 651 aaPredicted RBP20.84■□□□□ 0.93
CLIP2-201ENST00000223398 CEP135Q66GS9 1140 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 LRSAM1Q6UWE0 723 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 IFI16Q16666 785 aaKnown RBP20.84■□□□□ 0.93
CLIP2-201ENST00000223398 BIRC3Q13489 604 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 KIAA0753Q2KHM9 967 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 SEC24BO95487 1268 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 UBXN1Q04323 297 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 PHKBQ93100 1093 aa20.84■□□□□ 0.93
CLIP2-201ENST00000223398 FAM196AQ6ZSG2 479 aa20.83■□□□□ 0.93
CLIP2-201ENST00000223398 CSADQ9Y600 493 aa20.83■□□□□ 0.92
CLIP2-201ENST00000223398 CCDC66A2RUB6 948 aa20.83■□□□□ 0.92
CLIP2-201ENST00000223398 GCOM1H8Y6P7 765 aaPredicted RBP20.83■□□□□ 0.92
CLIP2-201ENST00000223398 MYZAPP0CAP1 466 aa20.83■□□□□ 0.92
CLIP2-201ENST00000223398 BICDL2A1A5D9 508 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 RAPGEF1Q13905 1077 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 NAP1L4Q99733 375 aaKnown RBP20.82■□□□□ 0.92
CLIP2-201ENST00000223398 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.82■□□□□ 0.92
CLIP2-201ENST00000223398 ERICH4A6NGS2 130 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 CCDC65Q8IXS2 484 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 SNX14Q9Y5W7 946 aa20.82■□□□□ 0.92
CLIP2-201ENST00000223398 PABPN1LA6NDY0 278 aaKnown RBP20.81■□□□□ 0.92
CLIP2-201ENST00000223398 ZNF772Q68DY9 489 aaPredicted RBP20.81■□□□□ 0.92
CLIP2-201ENST00000223398 NEK11Q8NG66 645 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 SYT1P21579 422 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 FAM200AQ8TCP9 573 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 SNX21Q969T3 373 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 MCM3P25205 808 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 ADCY7P51828 1080 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 MAATS1Q7Z4T9 603 aa20.81■□□□□ 0.92
CLIP2-201ENST00000223398 TRAF5O00463 557 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms