RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
VPS18-201ENST00000220509 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
VPS18-201ENST00000220509 KBTBD3Q8NAB2 608 aa12.1□□□□□ -0.47
VPS18-201ENST00000220509 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
VPS18-201ENST00000220509 KCNQ2O43526 872 aa12.1□□□□□ -0.47
VPS18-201ENST00000220509 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPS18-201ENST00000220509 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
VPS18-201ENST00000220509 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
VPS18-201ENST00000220509 IARSP41252 1262 aaKnown RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 SYT10Q6XYQ8 523 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 TPM1P09493 284 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 SCP2P22307 547 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 CUL4AQ13619 759 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 CDC37L1Q7L3B6 337 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 SPTLC3Q9NUV7 552 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 PAX7P23759 505 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 ME3Q16798 604 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 ARGLU1Q9NWB6 273 aaPredicted RBP12.09□□□□□ -0.47
VPS18-201ENST00000220509 USP21Q9UK80 565 aa12.09□□□□□ -0.47
VPS18-201ENST00000220509 TRIM66O15016 1216 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 JAK2O60674 1132 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 SASH1O94885 1247 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 ZNF75DP51815 510 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 TMCO3Q6UWJ1 677 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 ATP5JP18859 108 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 SNW1Q13573 536 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 IL25Q9H293 177 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 TAF5LO75529 589 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 CYP7A1P22680 504 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 PDIA6Q15084 440 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 FBXO38Q6PIJ6 1188 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 LSG1Q9H089 658 aaKnown RBP12.08□□□□□ -0.48
VPS18-201ENST00000220509 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
VPS18-201ENST00000220509 GPS2Q13227 327 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 ATG3Q9NT62 314 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 NEBLO76041 1014 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
VPS18-201ENST00000220509 PAX3P23760 479 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 ZAP70P43403 619 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 USP5P45974 858 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 POLA2Q14181 598 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 HLFQ16534 295 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
VPS18-201ENST00000220509 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
VPS18-201ENST00000220509 DNAI1Q9UI46 699 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 SLC4A4Q9Y6R1 1079 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 GET4Q7L5D6 327 aaPredicted RBP12.07□□□□□ -0.48
VPS18-201ENST00000220509 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
VPS18-201ENST00000220509 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 NR1I2O75469 434 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 IKQ13123 557 aaPredicted RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 PSMD2Q13200 908 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 ZBTB43O43298 467 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 LMAN1P49257 510 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 BMS1Q14692 1282 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 FAM210AQ96ND0 272 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 ALG1Q9BT22 464 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■■■■■ 149.1
VPS18-201ENST00000220509 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 TPCN1Q9ULQ1 816 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms