RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.53
USP11-201ENST00000218348 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
USP11-201ENST00000218348 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 ARFGEF1Q9Y6D6 1849 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 PTPDC1A2A3K4 754 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 LIG1P18858 919 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 TSPY26PQ9H489 355 aa11.71□□□□□ -0.54
USP11-201ENST00000218348 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 SMIM22K7EJ46 135 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 PRC1O43663 620 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
USP11-201ENST00000218348 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 APPBP2Q92624 585 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 A0A087WWV3 80 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 B4E1Z4 1266 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 RFC4P35249 363 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 FAM193AP78312 1265 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 FAM43BQ6ZT52 329 aaPredicted RBP11.7□□□□□ -0.54
USP11-201ENST00000218348 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 ESPNB1AK53 854 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
USP11-201ENST00000218348 PDE6AP16499 860 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 KRT85P78386 507 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 PUM3Q15397 648 aaKnown RBP11.7□□□□□ -0.54
USP11-201ENST00000218348 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
USP11-201ENST00000218348 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
USP11-201ENST00000218348 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP11-201ENST00000218348 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 IGSF3O75054 1194 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 MBD4O95243 580 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 UBE2HP62256 183 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 PTMAP06454 111 aaKnown RBP11.69□□□□□ -0.54
USP11-201ENST00000218348 SLC5A1P13866 664 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 CHRNDQ07001 517 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 ERCC4Q92889 916 aaPredicted RBP11.69□□□□□ -0.54
USP11-201ENST00000218348 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
USP11-201ENST00000218348 PDIA3P30101 505 aaKnown RBP11.68□□□□□ -0.54
USP11-201ENST00000218348 CCDC152Q4G0S7 254 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 MICU3Q86XE3 530 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 VPS37DQ86XT2 251 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 SLX4Q8IY92 1834 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 UBE2Q2LH0YL09 131 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
USP11-201ENST00000218348 PDCP20941 246 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 ADD2P35612 726 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 LPIN2Q92539 896 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 CPLX1O14810 134 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 ZPR1O75312 459 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 CHAF1AQ13111 956 aaPredicted RBP11.68□□□□□ -0.54
USP11-201ENST00000218348 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
USP11-201ENST00000218348 TSGA10IPQ3SY00 556 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
USP11-201ENST00000218348 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
USP11-201ENST00000218348 MINDY4BA8MYZ0 360 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 KLRK1P26718 216 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 TRDNQ13061 729 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 CMTR1Q8N1G2 835 aaKnown RBP11.67□□□□□ -0.54
USP11-201ENST00000218348 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 CELF1Q92879 486 aaKnown RBP11.67□□□□□ -0.54
USP11-201ENST00000218348 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
USP11-201ENST00000218348 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
USP11-201ENST00000218348 FER1L6Q2WGJ9 1857 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
USP11-201ENST00000218348 CCDC183Q5T5S1 534 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 ZNF652Q9Y2D9 606 aa11.67□□□□□ -0.54
USP11-201ENST00000218348 PHKBQ93100 1093 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 TDO2P48775 406 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 ANTXR2P58335 489 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 MTFR1LQ9H019 292 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 NAPBQ9H115 298 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
USP11-201ENST00000218348 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 KCNA3P22001 575 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 CCDC173Q0VFZ6 552 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
USP11-201ENST00000218348 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
USP11-201ENST00000218348 LEO1Q8WVC0 666 aaPredicted RBP11.66□□□□□ -0.54
USP11-201ENST00000218348 GPR101Q96P66 508 aaPredicted RBP11.66□□□□□ -0.54
USP11-201ENST00000218348 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms