RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 GNL3LQ9NVN8 582 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 TIAM2Q8IVF5 1701 aa9.34□□□□□ -0.91
HMGXB4-201ENST00000216106 CLCN1P35523 988 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 RRP12Q5JTH9 1297 aaKnown RBP9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 APOA5Q6Q788 366 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 CKAP2LQ8IYA6 745 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 MYL10Q9BUA6 226 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 TOMM22Q9NS69 142 aa9.34□□□□□ -0.92
HMGXB4-201ENST00000216106 PNPLA7Q6ZV29 1317 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 CACNA1SQ13698 1873 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 NPHP1O15259 732 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 NFXL1Q6ZNB6 911 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 FAM84BQ96KN1 310 aaPredicted RBP9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 NACAP1Q9BZK3 213 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 ZSWIM5Q9P217 1185 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 TNRC6CQ9HCJ0 1690 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 GNAT2P19087 354 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 RPS8P62241 208 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 IGDCC4Q8TDY8 1250 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 TMEM87BQ96K49 555 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 LY9Q9HBG7 655 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 RGL2O15211 777 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 CDC27P30260 824 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 MFSD6Q6ZSS7 791 aa9.33□□□□□ -0.92
HMGXB4-201ENST00000216106 POLR3DP05423 398 aaPredicted RBP9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 FBXO18Q8NFZ0 1043 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 PHKBQ93100 1093 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 IFIT3O14879 490 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 ZBTB43O43298 467 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 ZNF396Q96N95 335 aaPredicted RBP9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 TFCP2L1Q9NZI6 479 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 AFF2P51816 1311 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 RFC4P35249 363 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
HMGXB4-201ENST00000216106 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 SMIM22K7EJ46 135 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 UVSSAQ2YD98 709 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 STAG1Q8WVM7 1258 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 GOLGA8AA7E2F4 631 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 MSNP26038 577 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 DYNLL1P63167 89 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 PLCB2Q00722 1185 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 TYRO3Q06418 890 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 SGMS1Q86VZ5 419 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 KRT23Q9C075 422 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC69A6NI79 296 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 KIF28PB7ZC32 967 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 ME1P48163 572 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 PPARAQ07869 468 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 ZNF384Q8TF68 577 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
HMGXB4-201ENST00000216106 HS1BP3Q53T59 392 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 ATL3Q6DD88 541 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 LRRC4BQ9NT99 713 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 JAG2Q9Y219 1238 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 MRVI1Q9Y6F6 885 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CDKL5O76039 1030 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 LIFRP42702 1097 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 FBXO33Q7Z6M2 555 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 MYH2Q9UKX2 1941 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 UBE2Q2LH0YL09 131 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 RANBP6O60518 1105 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 TM4SF1P30408 202 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CHAF1AQ13111 956 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 NTRK3Q16288 839 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CPLX2Q6PUV4 134 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
HMGXB4-201ENST00000216106 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 ADCY5O95622 1261 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms