RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 RIOK1Q9BRS2 568 aaKnown RBP11.91□□□□□ -0.5
RTCB-201ENST00000216038 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
RTCB-201ENST00000216038 SUGT1Q9Y2Z0 365 aa11.91□□□□□ -0.5
RTCB-201ENST00000216038 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
RTCB-201ENST00000216038 FOXP2O15409 715 aa11.9□□□□□ -0.5
RTCB-201ENST00000216038 HSPD1P10809 573 aaKnown RBP11.9□□□□□ -0.5
RTCB-201ENST00000216038 CRKP46108 304 aa11.9□□□□□ -0.5
RTCB-201ENST00000216038 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
RTCB-201ENST00000216038 TICAM2Q86XR7 235 aa11.9□□□□□ -0.5
RTCB-201ENST00000216038 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
RTCB-201ENST00000216038 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
RTCB-201ENST00000216038 DDNO94850 711 aaPredicted RBP11.89□□□□□ -0.51
RTCB-201ENST00000216038 LDHCP07864 332 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 OGFOD1Q8N543 542 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
RTCB-201ENST00000216038 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 MYO3BQ8WXR4 1341 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 CLCN1P35523 988 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
RTCB-201ENST00000216038 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
RTCB-201ENST00000216038 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
RTCB-201ENST00000216038 GPR75-ASB3A0A0A6YYF3 556 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 GAKO14976 1311 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 BAG3O95817 575 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 EGFRP00533 1210 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 CACNB3P54284 484 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 CFAP100Q494V2 611 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
RTCB-201ENST00000216038 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 C22orf23Q9BZE7 217 aa11.88□□□□□ -0.51
RTCB-201ENST00000216038 RBM8AQ9Y5S9 174 aaKnown RBP11.88□□□□□ -0.51
RTCB-201ENST00000216038 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 GPC2Q8N158 579 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 TGFBRAP1Q8WUH2 860 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
RTCB-201ENST00000216038 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
RTCB-201ENST00000216038 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
RTCB-201ENST00000216038 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
RTCB-201ENST00000216038 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 FGAP02671 866 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 RHBDL3P58872 404 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 ZDHHC15Q96MV8 337 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
RTCB-201ENST00000216038 USP40Q9NVE5 1235 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
RTCB-201ENST00000216038 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 HAND2P61296 217 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 PICALMQ13492 652 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 CDC42EP5Q6NZY7 148 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 MAPKAPK5Q8IW41 473 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 CRNKL1Q9BZJ0 848 aaKnown RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 SCAF8Q9UPN6 1271 aaKnown RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 SMIM22K7EJ46 135 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 EPS15P42566 896 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 USP5P45974 858 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 TDO2P48775 406 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 PPP4CP60510 307 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 EVX2Q03828 476 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 NBPF9Q3BBW0 867 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 IFNL3Q8IZI9 196 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 MYOZ2Q9NPC6 264 aa11.86□□□□□ -0.51
RTCB-201ENST00000216038 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
RTCB-201ENST00000216038 CYP2D7A0A087X1C5 515 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 IGSF3O75054 1194 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 GNAT2P19087 354 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
RTCB-201ENST00000216038 NFIAQ12857 509 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
RTCB-201ENST00000216038 DPF2Q92785 391 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 MRIQ9BWK5 157 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 NAPBQ9H115 298 aa11.85□□□□□ -0.51
RTCB-201ENST00000216038 DCP1AQ9NPI6 582 aaPredicted RBP11.85□□□□□ -0.51
RTCB-201ENST00000216038 SAP30BPQ9UHR5 308 aaKnown RBP11.85□□□□□ -0.51
RTCB-201ENST00000216038 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 HSPA4P34932 840 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 TCP10Q12799 353 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 CREB3L3Q68CJ9 461 aa11.84□□□□□ -0.51
RTCB-201ENST00000216038 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms