RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.85□□□□□ -1.79
NEB-201ENST00000172853 WDR64B1ANS9 1081 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 CAPN9O14815 690 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 NAA16Q6N069 864 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 CPSF3Q9UKF6 684 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 FRMD4BQ9Y2L6 1034 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ERICH4A6NGS2 130 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 CETN3O15182 167 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 FBXW10Q5XX13 1052 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RPGRIP1Q96KN7 1286 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 FARP1Q9Y4F1 1045 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 RTEL1-TNFRSF6BF6WH68 1400 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TMEM110-MUSTN1A8MSY1 372 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 LDHAL6AQ6ZMR3 332 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ANKS4BQ8N8V4 417 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ATP8B3O60423 1300 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TMOD1P28289 359 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 MIS12Q9H081 205 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ATP6V0A2Q9Y487 856 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 PPARGP37231 505 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 TMEM67Q5HYA8 995 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 KRT79Q5XKE5 535 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 GGNBP2Q9H3C7 697 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 GIMAP4Q9NUV9 329 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 PTPDC1A2A3K4 754 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 DDX5P17844 614 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 RNASELQ05823 741 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 GLT8D2Q9H1C3 349 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 RPRD1BQ9NQG5 326 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 IARSP41252 1262 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 PPP1R7Q15435 360 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SULT6B1Q6IMI4 303 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 AFAP1L1Q8TED9 768 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 VCX3AQ9NNX9 186 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 MRC2Q9UBG0 1479 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 DPP9Q86TI2 863 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 NT5DC4Q86YG4 428 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SECISBP2LQ93073 1101 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 ZBTB21Q9ULJ3 1066 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 FAN1Q9Y2M0 1017 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 HSPA1LP34931 641 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 DNA2P51530 1060 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 GKAP1Q5VSY0 366 aaPredicted RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 RIMBP2O15034 1052 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 GADD45BO75293 160 aaPredicted RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 HSPA4P34932 840 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 CYLC1P35663 651 aaPredicted RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 NAPAP54920 295 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 GADL1Q6ZQY3 521 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ARHGAP24Q8N264 748 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 CCDC124Q96CT7 223 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 CNTLNQ9NXG0 1405 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 PTPRCP08575 1304 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ATXN8OSP0DMR3 200 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 KRT5P13647 590 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ITKQ08881 620 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 PRPSAP1Q14558 356 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 AKNAD1Q5T1N1 836 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SEL1L2Q5TEA6 688 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 UBE3BQ7Z3V4 1068 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 STMN2Q93045 179 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 FANCAO15360 1455 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SEC24BO95487 1268 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 RAB42Q8N4Z0 105 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SDCCAG3Q96C92 435 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ZBBXA8MT70 800 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SFSWAPQ12872 951 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 IFIT1BQ5T764 474 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 JAKMIP1Q96N16 626 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 OXCT2Q9BYC2 517 aaPredicted RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 FTOQ9C0B1 505 aaKnown RBP eCLIP3.84□□□□□ -1.79
NEB-201ENST00000172853 CDV3Q9UKY7 258 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.84□□□□□ -1.79
NEB-201ENST00000172853 KRT28Q7Z3Y7 464 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 IFNL2Q8IZJ0 200 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SPC24Q8NBT2 197 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 CNNM2Q9H8M5 875 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 SYTL2Q9HCH5 934 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ANO10Q9NW15 660 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 HYPKQ9NX55 129 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 RAB23Q9ULC3 237 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 ESR2Q92731 530 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 EIF2AQ9BY44 585 aaKnown RBP3.84□□□□□ -1.79
NEB-201ENST00000172853 TNNQ9UQP3 1299 aa3.84□□□□□ -1.79
NEB-201ENST00000172853 IQCB1Q15051 598 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 TEKT4Q8WW24 435 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 GNA11P29992 359 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 ALDH1B1P30837 517 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 OTUD6AQ7L8S5 288 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 WAPLQ7Z5K2 1190 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 NEK11Q8NG66 645 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 SFMBT1Q9UHJ3 866 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 NPM3O75607 178 aaKnown RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 HARSP12081 509 aaKnown RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 STAT6P42226 847 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 MNAT1P51948 309 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 WTAPQ15007 396 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 RAB44Q7Z6P3 723 aaPredicted RBP3.84□□□□□ -1.8
NEB-201ENST00000172853 CPLX4Q7Z7G2 160 aa3.84□□□□□ -1.8
NEB-201ENST00000172853 CTAGE3PQ8IX95 158 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms