RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
PDZD4-201ENST00000164640 RDXP35241 583 aaKnown RBP17.17■□□□□ 0.34
PDZD4-201ENST00000164640 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
PDZD4-201ENST00000164640 BEND6Q5SZJ8 279 aaPredicted RBP17.17■□□□□ 0.34
PDZD4-201ENST00000164640 ACRBPQ8NEB7 543 aa17.17■□□□□ 0.34
PDZD4-201ENST00000164640 METP08581 1390 aa17.17■□□□□ 0.34
PDZD4-201ENST00000164640 ENC1O14682 589 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 KIAA0754O94854 1291 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 MAP2K2P36507 400 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 BRMS1Q9HCU9 246 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 LRRC31Q6UY01 552 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 NAPGQ99747 312 aaPredicted RBP17.16■□□□□ 0.34
PDZD4-201ENST00000164640 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
PDZD4-201ENST00000164640 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 ALDH8A1Q9H2A2 487 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-201ENST00000164640 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 SAFBQ15424 915 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDZD4-201ENST00000164640 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 FAM107BQ9H098 131 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 FDPSP14324 419 aaKnown RBP17.15■□□□□ 0.34
PDZD4-201ENST00000164640 USP8P40818 1118 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 PDE4BQ07343 736 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 MAP9Q49MG5 647 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-201ENST00000164640 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 GEMIN8Q9NWZ8 242 aaKnown RBP17.15■□□□□ 0.34
PDZD4-201ENST00000164640 SAMM50Q9Y512 469 aa17.15■□□□□ 0.34
PDZD4-201ENST00000164640 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.34
PDZD4-201ENST00000164640 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 ATP5JP18859 108 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 HOXC9P31274 260 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 RBL2Q08999 1139 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 GSPT2Q8IYD1 628 aaKnown RBP17.14■□□□□ 0.33
PDZD4-201ENST00000164640 ANKZF1Q9H8Y5 726 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 CCDC70Q6NSX1 233 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 GIMAP7Q8NHV1 300 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 PCMTD1Q96MG8 357 aaPredicted RBP17.14■□□□□ 0.33
PDZD4-201ENST00000164640 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 LMTK2Q8IWU2 1503 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
PDZD4-201ENST00000164640 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
PDZD4-201ENST00000164640 BANK1Q8NDB2 785 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
PDZD4-201ENST00000164640 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 ZEB2O60315 1214 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 PPFIA4O75335 1185 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
PDZD4-201ENST00000164640 FBXW10Q5XX13 1052 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 KBTBD3Q8NAB2 608 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 BCAS4Q8TDM0 211 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
PDZD4-201ENST00000164640 N4BP3O15049 544 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDZD4-201ENST00000164640 CORO7P57737 925 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 STIM1Q13586 685 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 MMS22LQ6ZRQ5 1243 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
PDZD4-201ENST00000164640 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
PDZD4-201ENST00000164640 A0A087WZG4 1122 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 TEX33O43247 280 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
PDZD4-201ENST00000164640 CASP14P31944 242 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 EPHA10Q5JZY3 1008 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 NOA1Q8NC60 698 aaKnown RBP17.12■□□□□ 0.33
PDZD4-201ENST00000164640 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 INPP5BP32019 993 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 MCTP2Q6DN12 878 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 EP400NLQ6ZTU2 488 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
PDZD4-201ENST00000164640 ZNF213O14771 459 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 CDC27P30260 824 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
PDZD4-201ENST00000164640 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
PDZD4-201ENST00000164640 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
PDZD4-201ENST00000164640 POSTNQ15063 836 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms