RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ccdc96Q9CR92 584 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Magea2Q9R2A2 320 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Npc1l1Q6T3U4 1333 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ifi207E9Q3L4 978 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 HibadhQ99L13 335 aaKnown RBP17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Clrn2B2RVW2 232 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Il7P10168 154 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Fkbp1aP26883 108 aaKnown RBP17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Rps6kb1Q8BSK8 525 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 GnaqP21279 359 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Sap30bpQ02614 308 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Fam178bQ24JP3 464 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Taf3Q5HZG4 932 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Efcc1Q9JJF6 558 aa17.68■□□□□ 0.42
Upf1-202ENSMUST00000215817 Odf2A3KGV1 830 aaKnown RBP17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 KhnynQ80U38 671 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ugt1a5B2RT14 529 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Kiaa1211Q5PR69 1207 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Atg9aQ68FE2 551 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Cdca7lQ922M5 438 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Trim11Q99PQ2 467 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Sipa1l2Q80TE4 1722 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Mctp1E9PV86 951 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Rad23bP54728 416 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Eya3P97480 510 aa17.67■□□□□ 0.42
Upf1-202ENSMUST00000215817 Cspp1B2RX88 1205 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Znf771Q8BJ90 317 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Slc18a1Q8R090 521 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Mrps25Q9D125 171 aaKnown RBP17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Rufy3Q9D394 469 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Cxcl11Q9JHH5 100 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Nup88Q8CEC0 753 aaKnown RBP17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 TnmdQ9EP64 317 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Map3k15A2AQW0 1331 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Pls1Q3V0K9 630 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Fam228bQ497Q6 232 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Sf3b3Q921M3 1217 aaKnown RBP17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 BrapQ99MP8 591 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Mageb2A2AHM0 380 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Pde11aP0C1Q2 933 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Vps16Q920Q4 839 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Lmbr1Q9JIT0 490 aa17.66■□□□□ 0.42
Upf1-202ENSMUST00000215817 Vmn2r68L7N2B3 851 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Api5O35841 504 aaKnown RBP17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Oxr1Q4KMM3 866 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Haus6Q6NV99 933 aaKnown RBP17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Catsper2A2ARP9 588 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Npy5rO70342 466 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Tpm4Q6IRU2 248 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Pnpla7A2AJ88 1352 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Flt1P35969 1333 aa17.65■□□□□ 0.42
Upf1-202ENSMUST00000215817 Dpp8Q80YA7 892 aa17.64■□□□□ 0.42
Upf1-202ENSMUST00000215817 Ccdc172Q810N9 267 aa17.64■□□□□ 0.42
Upf1-202ENSMUST00000215817 Jakmip3Q5DTN8 844 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Bst2Q8R2Q8 172 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Nfat5Q9WV30 1534 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Eif5P59325 429 aaKnown RBP17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 PicalmQ7M6Y3 660 aaKnown RBP17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Acnat2Q8BGG9 420 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ptrh1Q8BW00 204 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ubxn2aQ99KJ0 258 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Fbxo3Q9DC63 480 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Atxn2lQ7TQH0 1049 aaKnown RBP17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ubac1Q8VDI7 409 aa17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 SetQ9EQU5 289 aaKnown RBP17.64■□□□□ 0.41
Upf1-202ENSMUST00000215817 Prss51A0A286YDY8 319 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 En2P09066 324 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Arhgef6Q8K4I3 771 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Gdpd2Q9ESM6 539 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 NalcnQ8BXR5 1738 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 DnttP09838 530 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Calm1P0DP26 149 aaKnown RBP17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Calm2P0DP27 149 aaKnown RBP17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Calm3P0DP28 149 aaKnown RBP17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Pramel6Q810Y9 485 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 MthfslL7N466 203 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Acap3Q6NXL5 833 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Smarcc2Q6PDG5 1213 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ccdc93Q7TQK5 629 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 PdcQ9QW08 244 aa17.63■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ano1Q8BHY3 960 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Kiaa1024Q8K3V7 917 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Rasa1E9PYG6 1038 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 NyxP83503 476 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Taf1dQ9D4V4 322 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Pus7B7ZNL8 666 aaKnown RBP17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ccdc82Q6PG04 518 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Glis3Q6XP49 780 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Dynll2Q9D0M5 89 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Stxbp4Q9WV89 557 aa17.62■□□□□ 0.41
Upf1-202ENSMUST00000215817 Lmnb1P14733 588 aaKnown RBP17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ncaph2Q8BSP2 607 aa17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Ano3A2AHL1 981 aa17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Q3UJP5 209 aa17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Mtfr1lQ9CWE0 289 aa17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Mrvi1Q9WUX5 899 aaKnown RBP17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Usp53P15975 1069 aa17.61■□□□□ 0.41
Upf1-202ENSMUST00000215817 Utp18Q5SSI6 552 aaKnown RBP17.6■□□□□ 0.41
Upf1-202ENSMUST00000215817 Fam196bQ6GQV1 535 aa17.6■□□□□ 0.41
Upf1-202ENSMUST00000215817 Tbc1d23Q8K0F1 684 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms