RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Ccdc12Q8R344 166 aaKnown RBP12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nid2O88322 1403 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Kif3cO35066 796 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Bola3Q8CEI1 110 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccdc7Q9D541 371 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccdc94Q9D6J3 314 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 MaddQ80U28 1577 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Dnajc25A2ALW5 357 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Gm9992B2RWK3 458 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Trim30cD3YVI9 513 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Gm20425E9Q035 978 aaKnown RBP12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 SrprbP47758 269 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Csrnp1P59054 583 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Acap3Q6NXL5 833 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Unc93aQ710D3 458 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Stn1Q8K2X3 378 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 VrtnQ3SYK4 740 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ncapg2Q6DFV1 1138 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Exoc1Q8R3S6 894 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 CltcQ68FD5 1675 aaKnown RBP12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccdc191J3QQ27 883 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Osbpl5Q9ER64 874 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Efcc1Q9JJF6 558 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Zfp113Q8C689 439 aa12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Usp42B2RQC2 1324 aaKnown RBP12.8□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ciao1Q99KN2 339 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ube3bQ9ES34 1070 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 AglF8VPN4 1532 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cyp3a57D3YYZ0 503 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 1700113H08RikE9Q9Q5 327 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Mylk2Q8VCR8 613 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nol7Q9D7Z3 254 aaKnown RBP12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Kcnn1Q9EQR3 537 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 IcoslgQ9JHJ8 322 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 FliiQ9JJ28 1271 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Palm3A2TJV2 734 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ppfibp2O35711 882 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Pde11aP0C1Q2 933 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cd22P35329 862 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Rrp1P56183 494 aaKnown RBP12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ctdp1Q7TSG2 960 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Chaf1aQ9QWF0 911 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 DmtnQ9WV69 405 aa12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Xrn1P97789 1719 aaKnown RBP12.79□□□□□ -0.36
Trim9-202ENSMUST00000110522 Paxbp1P58501 919 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Wdr70Q3TWF6 657 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Brinp3Q499E0 766 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nop2Q922K7 793 aaKnown RBP12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 PparaP23204 468 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Psmb7P70195 277 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Uba5Q8VE47 403 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Krt79Q8VED5 531 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ltb4r2Q9JJL9 360 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 InhbeO08717 350 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Oxr1Q4KMM3 866 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Susd4Q8BH32 490 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Iqsec2Q5DU25 1478 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 SsbP32067 415 aaKnown RBP12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Frat1P70339 274 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccdc174Q3U155 467 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Anp32cQ64G17 123 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccdc93Q7TQK5 629 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Clic4Q9QYB1 253 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ccne2Q9Z238 404 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Suclg2Q9Z2I8 433 aa12.78□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ube4aE9Q735 1028 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Mindy4Q3UQI9 744 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Hspa4Q61316 841 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Clic6Q8BHB9 596 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Q8BZJ8 459 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Arhgef28P97433 1693 aa12.77□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nlrp2Q4PLS0 1046 aaKnown RBP12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 SltmQ8CH25 1031 aaKnown RBP12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Paf1Q8K2T8 535 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 AdpgkQ8VDL4 496 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Arpp21Q9DCB4 807 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Plekhg2Q6KAU7 1340 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Mx1P09922 631 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Gna11P21278 359 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Dynll1P63168 89 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Pfkfb1P70266 471 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Jakmip3Q5DTN8 844 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Mb21d2Q8C525 428 aa12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Brd3Q8K2F0 726 aaKnown RBP12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 Gtf2iQ9ESZ8 998 aaKnown RBP12.77□□□□□ -0.37
Trim9-202ENSMUST00000110522 PicalmQ7M6Y3 660 aaKnown RBP12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Yeats4Q9CR11 227 aaKnown RBP12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Sorbs3Q9R1Z8 733 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Ttc37F8VPK0 1563 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Tbc1d2B1AVH7 922 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Atp2b1G5E829 1220 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Jade2Q6ZQF7 829 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Srp68Q8BMA6 625 aaKnown RBP12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Smtnl1Q99LM3 459 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Setdb1O88974 1307 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Ms4a2P20490 235 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Zdhhc9P59268 364 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 1700013D24RikQ0P521 120 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Sptlc3Q8BG54 563 aa12.76□□□□□ -0.37
Trim9-202ENSMUST00000110522 Ccdc105Q9D4K7 499 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 86.1 ms