RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Kank4Q6P9J5 1016 aa26.8■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Frmd7A2AD83 703 aa26.79■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Kcnq3Q8K3F6 873 aa26.79■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Hps4Q99KG7 671 aa26.79■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Tmem79Q9D709 391 aa26.79■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Pcdhb9E9Q5G2 828 aa26.78■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Rps12P63323 132 aaKnown RBP26.78■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Agtpbp1Q641K1 1218 aa26.78■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Pdlim2Q8R1G6 349 aa26.78■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Ugt1a5B2RT14 529 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Adam7O35227 789 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Grem2O88273 168 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Cap1P40124 474 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Usp44Q8C2S0 711 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Lrrfip2Q91WK0 415 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Tbc1d7Q9D0K0 293 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Col24a1Q30D77 1733 aa26.77■■□□□ 1.88
Scn1b-201ENSMUST00000098548 Npr3P70180 536 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Rps6kb1Q8BSK8 525 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Hdac9Q99N13 588 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Tnip1Q9WUU8 647 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 NrapQ80XB4 1728 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Tsc2Q61037 1814 aa26.76■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Arid4aF8VPQ2 1261 aaKnown RBP26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 NpcdF8VQB8 469 aa26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 NyxP83503 476 aa26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Esyt2Q3TZZ7 845 aa26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Pla2g12bQ99P27 195 aa26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Znf326O88291 580 aa26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 ImmtQ8CAQ8 757 aaKnown RBP26.75■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Myh6Q02566 1938 aaKnown RBP26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Plcb2A3KGF7 1181 aa26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Syt1P46096 421 aa26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Cacnb3P54285 484 aa26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ndfip2Q91ZP6 311 aa26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Rufy3Q9D394 469 aa26.74■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Irgm2A0A140LIF8 407 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Mageb2A2AHM0 380 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Prss40A6H6T1 365 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Hspd1P63038 573 aaKnown RBP26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Adgre1Q61549 931 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Rassf8Q8CJ96 419 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Stn1Q8K2X3 378 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ces1dQ8VCT4 565 aa26.73■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Pnpla6Q3TRM4 1355 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Gm45015A0A140LII9 184 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Gm18336A0A140LIU8 765 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Tbc1d2bQ3U0J8 965 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Cnot7Q60809 285 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Bms1Q6PGF5 1284 aaKnown RBP26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Adck5Q80V03 582 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Rasgrp4Q8BTM9 673 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ascc2Q91WR3 749 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Smc3Q9CW03 1217 aaKnown RBP26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ppil2Q9D787 521 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 RabggtaQ9JHK4 567 aa26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Rbm6S4R1W5 1118 aaKnown RBP26.72■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Slc4a4O88343 1079 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Pde4aO89084 844 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ppp4cP97470 307 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Mum1l1Q4VA55 681 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 ErmnQ5EBJ4 281 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ssh1Q76I79 1042 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 CrcpO35427 148 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Ppef1O35655 650 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Bnip3O55003 187 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Myl6bQ8CI43 207 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Cdca7lQ922M5 438 aa26.71■■□□□ 1.87
Scn1b-201ENSMUST00000098548 Wnt10bP48614 389 aa26.7■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Bag4Q8CI61 457 aa26.7■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Tbc1d23Q8K0F1 684 aa26.7■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Pof1bQ8K4L4 587 aa26.7■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Dpp7Q9ET22 506 aa26.7■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Elmsan1E9Q2I4 1089 aaKnown RBP26.69■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Trappc12Q8K2L8 797 aa26.69■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Aox3G3X982 1335 aa26.69■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Pappa2E9PZ87 1789 aa26.68■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Gas1Q01721 343 aa26.68■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Kbtbd13Q8C828 458 aa26.68■■□□□ 1.86
Scn1b-201ENSMUST00000098548 LdhdQ7TNG8 484 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Rbm43Q99J64 343 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Lbhd1A0A087WPA0 259 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Ercc3P49135 783 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Rpusd2Q149F1 553 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Oog3Q3UWY1 500 aa26.67■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Aox4Q3TYQ9 1336 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Gxylt1Q3UHH8 404 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Alx1Q8C8B0 326 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Ccdc158Q8CDI6 1109 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Bloc1s4Q8VED2 215 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Glipr1l2Q9CQ35 332 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Tgm5Q9D7I9 724 aa26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Usp42B2RQC2 1324 aaKnown RBP26.66■■□□□ 1.86
Scn1b-201ENSMUST00000098548 UncxO08934 530 aa26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Ddit3P35639 168 aa26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Ppp1r10Q80W00 888 aaKnown RBP26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Atad2Q8CDM1 1040 aa26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Lman1lQ8VCD3 505 aa26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Ubxn2aQ99KJ0 258 aa26.65■■□□□ 1.86
Scn1b-201ENSMUST00000098548 Sik3Q6P4S6 1311 aa26.65■■□□□ 1.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms