RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Atp6v0a4Q920R6 833 aa15.62■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Zfp202Q8C879 641 aa15.62■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Spats2Q8K1N4 545 aaKnown RBP15.62■□□□□ 0.09
Col3a1-201ENSMUST00000087883 AI481877A2ALV5 1481 aa15.62■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Art2aP17981 287 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Kank4Q6P9J5 1016 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Calml3Q9D6P8 149 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Kdm2bQ6P1G2 1309 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Mmp8O70138 465 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Pak2Q8CIN4 524 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Fsip1Q9D3V5 435 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Sf3a3Q9D554 501 aaKnown RBP15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Nedd9O35177 833 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Pabpn1lQ5XFR0 273 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Cep83Q9D5R3 692 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Plekhg2Q6KAU7 1340 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Casp1P29452 402 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Taok1Q5F2E8 1001 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Slc38a10Q5I012 1090 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Prdm1Q60636 856 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Ccdc113Q8C5T8 377 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Rbm17Q8JZX4 405 aaKnown RBP15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Aox1O54754 1333 aa15.61■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Gm29094F6Q785 221 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 ByslO54825 436 aaKnown RBP15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 FanccP50652 591 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Q8BZJ8 459 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Pdcd6ipQ9WU78 869 aaKnown RBP15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Dnajc25A2ALW5 357 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 PparaP23204 468 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Col4a3bpQ9EQG9 624 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Bach2P97303 839 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Ppp6r3Q922D4 844 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Mis12Q9CY25 206 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Speer2E9Q9U2 264 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Tbc1d31Q6NXY1 996 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Vps52Q8C754 723 aaKnown RBP15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 HgsQ99LI8 775 aa15.6■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Gapvd1Q6PAR5 1458 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Igf1rQ60751 1373 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Gm30191A0A0U1RNT7 187 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Senp1P59110 640 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Olfm5Q8BU90 496 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Klhl20Q8VCK5 604 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Znf365Q8BG89 408 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Kifap3P70188 793 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 NapaQ9DB05 295 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Neo1P97798 1493 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Cpsf2O35218 782 aaKnown RBP15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Mx1P09922 631 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Bach1P97302 739 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Arhgef2Q60875 985 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Fam228aQ8CDW1 299 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Krt71Q9R0H5 524 aa15.59■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Ccdc7Q9D541 371 aa15.58■□□□□ 0.09
Col3a1-201ENSMUST00000087883 Actn3O88990 900 aaKnown RBP15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Stim2P83093 746 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Mrpl12Q9DB15 201 aaKnown RBP15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Mast3Q3U214 1321 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ankrd50F7BE84 1390 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Nsd3Q6P2L6 1439 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sclt1G5E861 688 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Becn2P0DM65 447 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 PrphP15331 475 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Krt19P19001 403 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rassf10Q8BL43 508 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Hirip3Q8BLH7 601 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Prr16A3KMN5 304 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Hmgb2P30681 210 aaKnown RBP15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ccnl1Q52KE7 532 aaKnown RBP15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Eme2Q56A04 373 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rsad2Q8CBB9 362 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Cplx3Q8R1B5 158 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 AdpgkQ8VDL4 496 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sec63Q8VHE0 760 aaKnown RBP15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 St5Q924W7 1134 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Dydc2Q9D3X8 139 aa15.58■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Pus7B7ZNL8 666 aaKnown RBP15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 IntuQ059U7 942 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Anks6Q6GQX6 883 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Ccdc28aQ8CEI3 192 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rlbp1Q9Z275 317 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Kif22Q3V300 660 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 RbsnQ80Y56 783 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gbp9Q8BTS3 619 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Tpcn2Q8BWC0 731 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Traf3ip3Q8C0G2 513 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Abcc4E9Q236 1325 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 OvosQ3UU35 1456 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 TnksQ6PFX9 1320 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 EmbP21995 330 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Fbln2P37889 1221 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Hdac9Q99N13 588 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 TnnQ80Z71 1560 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Gpatch8A2A6A1 1505 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 FibpQ9JI19 357 aa15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Rbm26Q6NZN0 1012 aaKnown RBP15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Sept11Q8C1B7 431 aaKnown RBP15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Pym1Q8CHP5 203 aaKnown RBP15.57■□□□□ 0.08
Col3a1-201ENSMUST00000087883 Tbc1d2B1AVH7 922 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms