RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	C17orf77	Q96MU5	243 aa		13.39	□□□□□ -0.27
PHGDH-223	ENST00000641597	RNF2	Q99496	336 aa		13.39	□□□□□ -0.27
PHGDH-223	ENST00000641597	HILPDA	Q9Y5L2	63 aa		13.39	□□□□□ -0.27
PHGDH-223	ENST00000641597	DIRC3	C9JPN6	131 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	CD3E	P07766	207 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	OR2D3	Q8NGH3	330 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	PERP	Q96FX8	193 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	VAMP8	Q9BV40	100 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	ONECUT1	Q9UBC0	465 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	PPIAL4C	A0A0B4J2A2	164 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	SH2D7	A6NKC9	451 aa	Predicted RBP	13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	VSTM5	A8MXK1	200 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	HYPM	O75409	117 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	HLA-DQA1	P01909	254 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	MT-ND6	P03923	174 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	PPIAL4G	P0DN37	164 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	NUTF2	P61970	127 aa	Known RBP	13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	BATF	Q16520	125 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	MUC15	Q8N387	334 aa		13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	SRSF12	Q8WXF0	261 aa	Known RBP	13.38	□□□□□ -0.27
PHGDH-223	ENST00000641597	RBP4	P02753	201 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	KLRD1	Q13241	179 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	PLGLA	Q15195	96 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	PMCHL1	Q16048	86 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	TEX45	Q8NA69	505 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	TMEM116	Q8NCL8	245 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	GTSF1	Q8WW33	167 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	CLEC7A	Q9BXN2	247 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597		Q9H3A6	140 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	ZNF324	O75467	553 aa	Predicted RBP	13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	C3orf79	P0CE67	100 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	RAB4A	P20338	218 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	FOXA3	P55318	350 aa	Predicted RBP	13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	TMEM183B	Q1AE95	376 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	RPE	Q96AT9	228 aa		13.37	□□□□□ -0.27
PHGDH-223	ENST00000641597	TIMM23	O14925	209 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	TCAP	O15273	167 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	ARF6	P62330	175 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	CIART	Q8N365	385 aa	Predicted RBP	13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	NBL1	P41271	181 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	OR10J3	Q5JRS4	329 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	GRAMD2B	Q96HH9	432 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	TRGV9	Q99603	122 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	ZNF586	Q9NXT0	402 aa		13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597	F11R	Q9Y624	299 aa	Known RBP	13.36	□□□□□ -0.27
PHGDH-223	ENST00000641597		M0R143	59 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	IGLC1	P0CG04	106 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	PGLYRP4	Q96LB8	373 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	NGB	Q9NPG2	151 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597		B9A039	149 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	CASP6	P55212	293 aa		13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	ZNF672	Q499Z4	452 aa	Predicted RBP	13.35	□□□□□ -0.27
PHGDH-223	ENST00000641597	TCRA	P04437	139 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	PRRX1	P54821	245 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	FAM231D	Q6ZW35	169 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	MLST8	Q9BVC4	326 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	TP73-AS1	Q9UF72	201 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	CNIH1	O95406	144 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	IGKV1-17	P01599	117 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	MMD	Q15546	238 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	RNASEK	Q6P5S7	137 aa	Known RBP	13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	GPR82	Q96P67	336 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597	MIEN1	Q9BRT3	115 aa		13.34	□□□□□ -0.27
PHGDH-223	ENST00000641597		I3L2K1	104 aa		13.33	□□□□□ -0.27
PHGDH-223	ENST00000641597	PVRIG	Q6DKI7	326 aa		13.33	□□□□□ -0.27
PHGDH-223	ENST00000641597	ETFRF1	Q6IPR1	90 aa		13.33	□□□□□ -0.27
PHGDH-223	ENST00000641597	C20orf144	Q9BQM9	153 aa		13.33	□□□□□ -0.27
PHGDH-223	ENST00000641597	RPL19	P84098	196 aa	Known RBP	13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	LBH	Q53QV2	105 aa	Predicted RBP	13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	GOLT1A	Q6ZVE7	132 aa		13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	C8orf46	Q8TAG6	207 aa		13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	C22orf15	Q8WYQ4	148 aa		13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	URB1-AS1	Q96HZ7	61 aa		13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.33	□□□□□ -0.28
PHGDH-223	ENST00000641597	TFPI2	P48307	235 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	SST	P61278	116 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	SPATA12	Q7Z6I5	190 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	PRNT	Q86SH4	94 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	HIGD1A	Q9Y241	93 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	KLF12	Q9Y4X4	402 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	ZNF785	A8K8V0	405 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597		K7ENP7	123 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	HIST1H1E	P10412	219 aa	Known RBP	13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	VKORC1	Q9BQB6	163 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	CLEC5A	Q9NY25	188 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	HIVEP3	Q5T1R4	2406 aa		13.32	□□□□□ -0.28
PHGDH-223	ENST00000641597	ZNF138	P52744	262 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	SPATA45	Q537H7	98 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	EBLN2	Q6P2I7	272 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	C5orf17	Q8NAS9	161 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	RPP21	Q9H633	154 aa	Known RBP	13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	CCL21	O00585	134 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597	LTA	P01374	205 aa		13.31	□□□□□ -0.28
PHGDH-223	ENST00000641597		A0A1B0GXF2	115 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	LY6L	H3BQJ8	138 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597		K7EIM0	57 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	IGLV2-11	P01706	119 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	IGHV3-23	P01764	117 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	CYB5R2	Q6BCY4	276 aa		13.3	□□□□□ -0.28

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