RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 GAR1Q9NY12 217 aaKnown RBP10.17□□□□□ -0.78
PHGDH-221ENST00000641573 TRAV5A0A0B4J249 113 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 WI2-2373I1.2A0A1W2PRP0 233 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 NUPL2O15504 423 aaKnown RBP10.16□□□□□ -0.78
PHGDH-221ENST00000641573 CLEC3BP05452 202 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 GCHFRP30047 84 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 PPT1P50897 306 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 AWAT1Q58HT5 328 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 LINC00305Q7Z4B0 112 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 CCDC140Q96MF4 163 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 UHRF2Q96PU4 802 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 KLK15Q9H2R5 256 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 MANBALQ9NQG1 85 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 VAX2Q9UIW0 290 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 HIGD1AQ9Y241 93 aa10.16□□□□□ -0.78
PHGDH-221ENST00000641573 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
PHGDH-221ENST00000641573 SFTA3P0C7M3 94 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 ADMP35318 185 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 TAGLN2P37802 199 aaKnown RBP10.15□□□□□ -0.78
PHGDH-221ENST00000641573 Q8N2B8 174 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 RNF125Q96EQ8 232 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 FAM167A-AS1Q96KT0 104 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 ATP6V0BQ99437 205 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 ESM1Q9NQ30 184 aa10.15□□□□□ -0.78
PHGDH-221ENST00000641573 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
PHGDH-221ENST00000641573 F8W036 122 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 TGOLN2O43493 480 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 OR7C2O60412 319 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 PAGE4O60829 102 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 OR2C1O95371 312 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 IGHG4P01861 327 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 HSPB1P04792 205 aaKnown RBP10.14□□□□□ -0.79
PHGDH-221ENST00000641573 IL4P05112 153 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 RAB9AP51151 201 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 HILS1P60008 231 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 SLC35B1P78383 322 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF600Q6ZNG1 722 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 PQLC2Q6ZP29 291 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF329Q86UD4 541 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF503Q96F45 646 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF747Q9BV97 191 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 SLC35B3Q9H1N7 401 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 TMEM167BQ9NRX6 74 aa10.14□□□□□ -0.79
PHGDH-221ENST00000641573 A0A0G2JLM5 398 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 CLDN34H7C241 214 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 ADCYAP1P18509 176 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 UBE2G2P60604 165 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 LCNL1Q6ZST4 164 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF414Q96IQ9 312 aa10.13□□□□□ -0.79
PHGDH-221ENST00000641573 SLC25A39Q9BZJ4 359 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-221ENST00000641573 PUS1Q9Y606 427 aaKnown RBP eCLIP10.13□□□□□ -0.79
PHGDH-221ENST00000641573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.12□□□□□ -0.79
PHGDH-221ENST00000641573 FAM181BA6NEQ2 426 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 PPP5D1E7EU14 171 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 PSMB8P28062 276 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 USF2Q15853 346 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-221ENST00000641573 C10orf91Q5T1B1 145 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 TOMM20LQ6UXN7 152 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 OR51M1Q9H341 326 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 VWFP04275 2813 aa10.12□□□□□ -0.79
PHGDH-221ENST00000641573 IGHV3-35A0A0C4DH35 117 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 H3BRN7 92 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 APOC3P02656 99 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 ELANEP08246 267 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 OR10J4P0C629 311 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 PYYP10082 97 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 ARL3P36405 182 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 CD81P60033 236 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 RELQ04864 619 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 FOXL1Q12952 345 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 FOXE3Q13461 319 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 CST9LP1Q5W188 147 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 LEMD1Q68G75 181 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 ZNF343Q6P1L6 599 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 TEX38Q6PEX7 206 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 Q6ZSV7 163 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 S100A7AQ86SG5 101 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 CYB561D1Q8N8Q1 229 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 OR4X2Q8NGF9 303 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms