RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 FAM231DQ6ZW35 169 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 ZNF586Q9NXT0 402 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 KLF12Q9Y4X4 402 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 GRIFINA4D1Z8 144 aa16.94■□□□□ 0.3
CLN6-224ENST00000638076 GNG7O60262 68 aa16.94■□□□□ 0.3
CLN6-224ENST00000638076 RPL19P84098 196 aaKnown RBP16.94■□□□□ 0.3
CLN6-224ENST00000638076 ZNF491Q8N8L2 437 aa16.94■□□□□ 0.3
CLN6-224ENST00000638076 GNB1LQ9BYB4 327 aa16.94■□□□□ 0.3
CLN6-224ENST00000638076 IL4P05112 153 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 FAM106CPP0CH98 169 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 HIST1H1EP10412 219 aaKnown RBP16.93■□□□□ 0.3
CLN6-224ENST00000638076 FAM120AOSQ5T036 256 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 TMEM256Q8N2U0 113 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 GBGT1Q8N5D6 347 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 TMEM18Q96B42 140 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 AJUBAQ96IF1 538 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 TRBV9A0A0B4J1U6 114 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 IGHV4-39P01824 125 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 NUDT10Q8NFP7 164 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 RNF125Q96EQ8 232 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 NUDT11Q96G61 164 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 TMEM68Q96MH6 324 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 SHANK2-AS3Q9BTD1 123 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 PIEZO1Q92508 2521 aa16.93■□□□□ 0.3
CLN6-224ENST00000638076 GATCO43716 136 aaKnown RBP16.92■□□□□ 0.3
CLN6-224ENST00000638076 TCRAP04437 139 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 Q8N9W7 124 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 GPR82Q96P67 336 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 C7orf69Q9H7B7 122 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 LPAR2Q9HBW0 351 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 IGHV7-81A0A0B4J1V7 117 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 TRAV20A0A0B4J274 112 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 H3BRN7 92 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 SAA4P35542 130 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 MFAP4P55083 255 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 AKAP6Q13023 2319 aa16.92■□□□□ 0.3
CLN6-224ENST00000638076 TRAV30A0A087WSZ9 112 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 MRPL54Q6P161 138 aaKnown RBP16.91■□□□□ 0.3
CLN6-224ENST00000638076 MBD6Q96DN6 1003 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 FMC1Q96HJ9 113 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 OTORQ9NRC9 128 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 NAT8BQ9UHF3 227 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 EGR2P11161 476 aaPredicted RBP16.91■□□□□ 0.3
CLN6-224ENST00000638076 JOSD1Q15040 202 aaPredicted RBP16.91■□□□□ 0.3
CLN6-224ENST00000638076 DNLZQ5SXM8 178 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 WDR73Q6P4I2 378 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 BPIFA4PQ86YQ2 179 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 EXOC3-AS1Q8N2X6 119 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 C1RLQ9NZP8 487 aa16.91■□□□□ 0.3
CLN6-224ENST00000638076 WI2-2373I1.2A0A1W2PRP0 233 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 IZUMO1RA6ND01 250 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 F8W735 103 aaPredicted RBP16.9■□□□□ 0.3
CLN6-224ENST00000638076 NUPR1O60356 82 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 CRISP2P16562 243 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 Q56UQ5 140 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 SMIM12Q96EX1 92 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 GRAMD2BQ96HH9 432 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 PRDM13Q9H4Q3 707 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 CACNA1AO00555 2505 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 TMEM136Q6ZRR5 245 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 ZNF48Q96MX3 618 aaPredicted RBP16.9■□□□□ 0.3
CLN6-224ENST00000638076 MLST8Q9BVC4 326 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 C21orf62Q9NYP8 219 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 THYN1Q9P016 225 aa16.9■□□□□ 0.3
CLN6-224ENST00000638076 OR2J3O76001 311 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 LTAP01374 205 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 MT-ND6P03923 174 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 GZMBP10144 247 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 BRS3P32247 399 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 RAB4BP61018 213 aa16.89■□□□□ 0.29
CLN6-224ENST00000638076 NDUFB8O95169 186 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 IGHV3-23P01764 117 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 AMY1AP04745 511 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 FCGR2BP31994 310 aaPredicted RBP16.88■□□□□ 0.29
CLN6-224ENST00000638076 COX19Q49B96 90 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 C17orf77Q96MU5 243 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 TP53TG3Q9ULZ0 132 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 TMEM8BA6NDV4 472 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 HLA-DRB1P01911 266 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 USF2Q15853 346 aaPredicted RBP16.88■□□□□ 0.29
CLN6-224ENST00000638076 BCL6BQ8N143 479 aaPredicted RBP16.88■□□□□ 0.29
CLN6-224ENST00000638076 OR4F17Q8NGA8 305 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 HSPB9Q9BQS6 159 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 CHRDL1Q9BU40 450 aa16.88■□□□□ 0.29
CLN6-224ENST00000638076 TRBV19A0A075B6N1 114 aa16.87■□□□□ 0.29
CLN6-224ENST00000638076 PIP4P2Q8N4L2 257 aa16.87■□□□□ 0.29
CLN6-224ENST00000638076 OR5R1Q8NH85 324 aa16.87■□□□□ 0.29
CLN6-224ENST00000638076 CMTM2Q8TAZ6 248 aa16.87■□□□□ 0.29
CLN6-224ENST00000638076 IGLC2P0DOY2 106 aa16.87■□□□□ 0.29
CLN6-224ENST00000638076 TRAV8-1A0A0A6YYK1 113 aa16.86■□□□□ 0.29
CLN6-224ENST00000638076 NPFFO15130 113 aa16.86■□□□□ 0.29
CLN6-224ENST00000638076 LINC00322Q6ZN03 302 aaPredicted RBP16.86■□□□□ 0.29
CLN6-224ENST00000638076 NUP35Q8NFH5 326 aa16.86■□□□□ 0.29
CLN6-224ENST00000638076 RNF24Q9Y225 148 aa16.86■□□□□ 0.29
CLN6-224ENST00000638076 CENPVL3A0A0U1RRI6 287 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 OR2T8A6NH00 312 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 KIAA1644Q3SXP7 199 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 GOLT1AQ6ZVE7 132 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 TSKUQ8WUA8 353 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 ZNF331Q9NQX6 463 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms