RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
UBE3A-227ENST00000638011 GLRXP35754 106 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 PIN1P1O15428 100 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
UBE3A-227ENST00000638011 ANKRD29Q8N6D5 301 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 ZFP36L2P47974 494 aaKnown RBP12.64□□□□□ -0.39
UBE3A-227ENST00000638011 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
UBE3A-227ENST00000638011 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 FAM60AQ9NP50 221 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 A0A1W2PPM0 123 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 ATP5G1P05496 136 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 CISD3P0C7P0 127 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
UBE3A-227ENST00000638011 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 ATOX1O00244 68 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 PSG8Q9UQ74 426 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 PRSS12P56730 875 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
UBE3A-227ENST00000638011 NDUFS6O75380 124 aaKnown RBP12.62□□□□□ -0.39
UBE3A-227ENST00000638011 CXCL1P09341 107 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 KIAA1549LQ6ZVL6 1849 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 ERCC8Q13216 396 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 DRD3P35462 400 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 LY6G5BQ8NDX9 201 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
UBE3A-227ENST00000638011 GTSCR1Q86UQ5 136 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 NABP1Q96AH0 204 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 AGFG2O95081 481 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 Q6ZT83 130 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 PRCDQ00LT1 54 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 NUP35Q8NFH5 326 aa12.62□□□□□ -0.39
UBE3A-227ENST00000638011 NCR2O95944 276 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 LYL1P12980 280 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 SNHG12Q9BXW3 62 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 ANKHD1Q8IWZ3 2542 aaKnown RBP12.61□□□□□ -0.39
UBE3A-227ENST00000638011 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 PEAR1Q5VY43 1037 aaPredicted RBP12.61□□□□□ -0.39
UBE3A-227ENST00000638011 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
UBE3A-227ENST00000638011 GPR179Q6PRD1 2367 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 IGHV5-10-1A0A0J9YXX1 117 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 PF4P02776 101 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 TRAV13-2A0A0B4J235 113 aa12.61□□□□□ -0.39
UBE3A-227ENST00000638011 K7EMI3 77 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
UBE3A-227ENST00000638011 TRGV9Q99603 122 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 IGHV3-72A0A0B4J1Y9 119 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
UBE3A-227ENST00000638011 HRKO00198 91 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 ID3Q02535 119 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 IL17RELQ6ZVW7 336 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 NBR2O15453 112 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 A0A0J9YW62 118 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 LY6G6FQ5SQ64 297 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
UBE3A-227ENST00000638011 IGKV1D-16P01601 117 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 C16orf47Q6ZP98 133 aaPredicted RBP12.59□□□□□ -0.39
UBE3A-227ENST00000638011 TRIP6Q15654 476 aaKnown RBP12.59□□□□□ -0.39
UBE3A-227ENST00000638011 LINC00477Q96M19 166 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 PRO1854Q9UHT4 67 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 C1QTNF5Q9BXJ0 243 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 ABCA2Q9BZC7 2435 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 H3BTX0 84 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 GREM1O60565 184 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 BTCP35070 178 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 ZAR1Q86SH2 424 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 COX8AP10176 69 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
UBE3A-227ENST00000638011 hDV102S1A0JD36 115 aa12.58□□□□□ -0.39
UBE3A-227ENST00000638011 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.39
UBE3A-227ENST00000638011 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.39
UBE3A-227ENST00000638011 STHQ8IWL8 128 aa12.58□□□□□ -0.39
UBE3A-227ENST00000638011 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
UBE3A-227ENST00000638011 ITLN2Q8WWU7 325 aaPredicted RBP12.58□□□□□ -0.4
UBE3A-227ENST00000638011 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
UBE3A-227ENST00000638011 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.4
UBE3A-227ENST00000638011 AMN1Q8IY45 258 aa12.58□□□□□ -0.4
UBE3A-227ENST00000638011 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
UBE3A-227ENST00000638011 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
UBE3A-227ENST00000638011 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 MYF5P13349 255 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 PRIMA1Q86XR5 153 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 ZNF114Q8NC26 417 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 REG4Q9BYZ8 158 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 TRGV4A0A0C4DH28 118 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
UBE3A-227ENST00000638011 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 A0A087WX48 190 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 C6orf226Q5I0X4 101 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 CRIM1Q9NZV1 1036 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 A0A0G2JK05 382 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 FOXG1P55316 489 aaPredicted RBP12.57□□□□□ -0.4
UBE3A-227ENST00000638011 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms