RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-214ENST00000637709 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
SCN8A-214ENST00000637709 ELOA3CA0A087WX78 387 aaPredicted RBP12.05□□□□□ -0.48
SCN8A-214ENST00000637709 TRAV8-1A0A0A6YYK1 113 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 GNG7O60262 68 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 NBEAP1P0C6P0 100 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 GP9P14770 177 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 MEOX2P50222 304 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCN8A-214ENST00000637709 LY6EQ16553 131 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 PIMREGQ9BSJ6 248 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 SRD5A3Q9H8P0 318 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
SCN8A-214ENST00000637709 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-214ENST00000637709 CBLN1P23435 193 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 USF2Q15853 346 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-214ENST00000637709 OR8I2Q8N0Y5 310 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 C10orf105Q8TEF2 133 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 IGF2BP2-AS1Q96M15 143 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 PYGO2Q9BRQ0 406 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 PEX7O00628 323 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 GGCTO75223 188 aaKnown RBP12.04□□□□□ -0.48
SCN8A-214ENST00000637709 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF586Q9NXT0 402 aa12.04□□□□□ -0.48
SCN8A-214ENST00000637709 CLEC2AQ6UVW9 174 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 UNQ5815/PRO19632Q6UWF5 114 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF843Q8N446 348 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 RNF2Q99496 336 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 V9GYV3 84 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 C9JCJ5 164 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 FABP4P15090 132 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 HOXA5P20719 270 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 SRP14P37108 136 aaKnown RBP12.03□□□□□ -0.48
SCN8A-214ENST00000637709 C9orf152Q5JTZ5 239 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 CHRDL1Q9BU40 450 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 Q9H3A6 140 aa12.03□□□□□ -0.48
SCN8A-214ENST00000637709 ZNF491Q8N8L2 437 aa12.02□□□□□ -0.48
SCN8A-214ENST00000637709 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
SCN8A-214ENST00000637709 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
SCN8A-214ENST00000637709 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
SCN8A-214ENST00000637709 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
SCN8A-214ENST00000637709 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.49
SCN8A-214ENST00000637709 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 AVPP01185 164 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
SCN8A-214ENST00000637709 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
SCN8A-214ENST00000637709 EBI3Q14213 229 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 IBA57Q5T440 356 aaKnown RBP12.01□□□□□ -0.49
SCN8A-214ENST00000637709 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 BAGE2Q86Y30 109 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 TBL2Q9Y4P3 447 aaKnown RBP12.01□□□□□ -0.49
SCN8A-214ENST00000637709 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 CD99P14209 185 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 KRTAP10-9P60411 292 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 EPDR1Q9UM22 224 aa12.01□□□□□ -0.49
SCN8A-214ENST00000637709 BRS3P32247 399 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 GPR183P32249 361 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 IER3P46695 156 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 C15orf32Q32M92 178 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 MRPL54Q6P161 138 aaKnown RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 TTC9CQ8N5M4 171 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 NPIPB5A8MRT5 1133 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 ZNF705GA8MUZ8 300 aaPredicted RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 MYCNOSP40205 109 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 PAX8Q06710 450 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 LINC00322Q6ZN03 302 aaPredicted RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 GNB4Q9HAV0 340 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 IL36BQ9NZH7 164 aa12□□□□□ -0.49
SCN8A-214ENST00000637709 MRPL27Q9P0M9 148 aaKnown RBP12□□□□□ -0.49
SCN8A-214ENST00000637709 M0R3E3 92 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
SCN8A-214ENST00000637709 UBE2G1P62253 170 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 RPEL1Q2QD12 228 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 ARL2-SNX15V9GYD0 113 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 OOSP1A8MZH6 123 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 AMY1AP04745 511 aa11.99□□□□□ -0.49
SCN8A-214ENST00000637709 ADMP35318 185 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms