RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SEC14L6B5MCN3 397 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 PEX7O00628 323 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 STAG3L2P0CL84 134 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 STAG3L3P0CL85 134 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 HOXB4P17483 251 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 CRYBB3P26998 211 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 FHITP49789 147 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 C10orf55Q5SWW7 151 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TMEM219Q86XT9 240 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 ZFP30Q9Y2G7 519 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 SOX21Q9Y651 276 aaPredicted RBP4.44□□□□□ -1.7
CHD2-227ENST00000637572 TRAV9-1A0A075B6T8 112 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TRBV9A0A0B4J1U6 114 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TRAV3A0A0B4J244 114 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 A0A1B0GUS0 222 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 A0A1B0GW15 77 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 OVOL1O14753 267 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 IGHV3-48P01763 117 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 ZNF134P52741 427 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 ICAM4Q14773 271 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 SPANXN1Q5VSR9 72 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 LHFPL4Q7Z7J7 247 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 NHLRC2Q8NBF2 726 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 ATG101Q9BSB4 218 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 PARLQ9H300 379 aa4.44□□□□□ -1.7
CHD2-227ENST00000637572 IGHV4-30-2A0A087WSY4 118 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 A0A1W2PRX2 142 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 F5H697 171 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 IGHV3-11P01762 117 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 GPX1P07203 203 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 IFITM2Q01629 132 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 PRB3Q04118 309 aaPredicted RBP4.43□□□□□ -1.7
CHD2-227ENST00000637572 Q6ZRM9 215 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 ZNF439Q8NDP4 499 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 OR4B1Q8NGF8 309 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 ATP6V0BQ99437 205 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 LIME1Q9H400 295 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 YTHDF2Q9Y5A9 579 aaKnown RBP4.43□□□□□ -1.7
CHD2-227ENST00000637572 ADAMTS20P59510 1910 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 NDUFS7O75251 213 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 HLA-DQA1P01909 254 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 TFPI2P48307 235 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 PDE6HQ13956 83 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 MSMPQ1L6U9 139 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 LEMD1Q68G75 181 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 C9orf139Q6ZV77 190 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 GOLT1AQ6ZVE7 132 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 MIR17HGQ75NE6 70 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 FAM24BQ8N5W8 94 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 NPBQ8NG41 125 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 ASCL2Q99929 193 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 PEF1Q9UBV8 284 aaKnown RBP4.43□□□□□ -1.7
CHD2-227ENST00000637572 VPREB3Q9UKI3 123 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 A0A0G2JRQ6 117 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 TSTD3H0UI37 97 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 MMP23AO75900 390 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 PSG1P11464 419 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 C1orf194Q5T5A4 169 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 TMEM86BQ8N661 226 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 Q9H3A6 140 aa4.43□□□□□ -1.7
CHD2-227ENST00000637572 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
CHD2-227ENST00000637572 PPP1R17O96001 155 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 GCGP01275 180 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 LEPP41159 167 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 CCL20P78556 96 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 PRSS3P2Q8NHM4 247 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 KCNS1Q96KK3 526 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 CYTL1Q9NRR1 136 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 IGLV1-47P01700 117 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 IGHV3-23P01764 117 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 HIST1H1AQ02539 215 aaPredicted RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 CD300EQ496F6 205 aaPredicted RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 C11orf71Q6IPW1 123 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 TTC9CQ8N5M4 171 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 LY6G5BQ8NDX9 201 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 IGHV3-35A0A0C4DH35 117 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 INS-IGF2F8WCM5 200 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 ATP6V0E1O15342 81 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 TCF21O43680 179 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 SCGB1D1O95968 90 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 IGKV1-39P01597 117 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 IGKV1D-39P04432 117 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 CAMPP49913 170 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 SIGLEC15Q6ZMC9 328 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 NRGNQ92686 78 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 AP1S3Q96PC3 154 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 MGST2Q99735 147 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 WFDC1Q9HC57 220 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 DAZ1Q9NQZ3 744 aaKnown RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 EPDR1Q9UM22 224 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms