RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 TREM1Q9NP99 234 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 DOK5Q9P104 306 aa11.91□□□□□ -0.5
CLN6-219ENST00000637329 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.9□□□□□ -0.5
CLN6-219ENST00000637329 ANKRD34BA5PLL1 514 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 HAX1O00165 279 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
CLN6-219ENST00000637329 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 HSPB1P04792 205 aaKnown RBP11.9□□□□□ -0.5
CLN6-219ENST00000637329 IL4P05112 153 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 ORM2P19652 201 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 GCHFRP30047 84 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 RAB9AP51151 201 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 ZNF491Q8N8L2 437 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 TXNDC17Q9BRA2 123 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 CHRDL1Q9BU40 450 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 SERTAD4Q9NUC0 356 aa11.9□□□□□ -0.5
CLN6-219ENST00000637329 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
CLN6-219ENST00000637329 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 BMPR1BO00238 502 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 OR7C2O60412 319 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 CLEC3BP05452 202 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 ICAM4Q14773 271 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 OR5AU1Q8NGC0 362 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
CLN6-219ENST00000637329 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 SLC25A2Q9BXI2 301 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 VAX2Q9UIW0 290 aa11.89□□□□□ -0.51
CLN6-219ENST00000637329 TMEM218A2RU14 115 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 H3BRN7 92 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 CRLF1O75462 422 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 CRYBA1P05813 215 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 ARL3P36405 182 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 SRSF3P84103 164 aaKnown RBP11.88□□□□□ -0.51
CLN6-219ENST00000637329 HAGHQ16775 308 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 Q6ZSV7 163 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 SHANK2-AS3Q9BTD1 123 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
CLN6-219ENST00000637329 KLK15Q9H2R5 256 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
CLN6-219ENST00000637329 PUS1Q9Y606 427 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLN6-219ENST00000637329 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLN6-219ENST00000637329 UBE2L3P68036 154 aaKnown RBP11.87□□□□□ -0.51
CLN6-219ENST00000637329 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
CLN6-219ENST00000637329 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
CLN6-219ENST00000637329 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
CLN6-219ENST00000637329 TMPRSS5Q9H3S3 457 aa11.87□□□□□ -0.51
CLN6-219ENST00000637329 ZFAND3Q9H8U3 227 aa11.87□□□□□ -0.51
CLN6-219ENST00000637329 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
CLN6-219ENST00000637329 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
CLN6-219ENST00000637329 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
CLN6-219ENST00000637329 MORN5Q5VZ52 161 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 ZNF414Q96IQ9 312 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 LINC00052Q96N35 136 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 GNB4Q9HAV0 340 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 RABAC1Q9UI14 185 aa11.86□□□□□ -0.51
CLN6-219ENST00000637329 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 NDUFA4O00483 81 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 NDUFA7O95182 113 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 GP9P14770 177 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 C10orf91Q5T1B1 145 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 OR4X2Q8NGF9 303 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 UBE2E2Q96LR5 201 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 RARRES2Q99969 163 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
CLN6-219ENST00000637329 CARHSP1Q9Y2V2 147 aaKnown RBP11.85□□□□□ -0.51
CLN6-219ENST00000637329 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 PDE6DO43924 150 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 PAGE4O60829 102 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 SRP19P09132 144 aaKnown RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 KIAA0141Q14154 515 aaPredicted RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 TOMM20LQ6UXN7 152 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 KLHDC1Q8N7A1 406 aa11.84□□□□□ -0.51
CLN6-219ENST00000637329 NKX6-2Q9C056 277 aaPredicted RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
CLN6-219ENST00000637329 TRAV5A0A0B4J249 113 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 C9JQL5 133 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 C11orf94C9JXX5 98 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 PPP5D1E7EU14 171 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 F8W036 122 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 TCF21O43680 179 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 RPLP1P05386 114 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms