RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 CEP19Q96LK0 163 aa1.92□□□□□ -2.1
CLN5-212ENST00000636602 CHST6Q9GZX3 395 aa1.92□□□□□ -2.1
CLN5-212ENST00000636602 TMEM106BQ9NUM4 274 aa1.92□□□□□ -2.1
CLN5-212ENST00000636602 FAM32AQ9Y421 112 aaKnown RBP1.92□□□□□ -2.1
CLN5-212ENST00000636602 TANC1Q9C0D5 1861 aa1.92□□□□□ -2.1
CLN5-212ENST00000636602 DNAH12Q6ZR08 3092 aa1.92□□□□□ -2.1
CLN5-212ENST00000636602 MPDZO75970 2070 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 SCN10AQ9Y5Y9 1956 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 HMSDA8MTL9 139 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 PGLYRP1O75594 196 aaPredicted RBP1.91□□□□□ -2.1
CLN5-212ENST00000636602 IFNA10P01566 189 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 RBP1P09455 135 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 NEFHP12036 1026 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 CYBAP13498 195 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 RPS4Y1P22090 263 aaKnown RBP1.91□□□□□ -2.1
CLN5-212ENST00000636602 TAF1AQ15573 450 aaPredicted RBP1.91□□□□□ -2.1
CLN5-212ENST00000636602 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 BPIFA4PQ86YQ2 179 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 GDPD1Q8N9F7 314 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 RNASE11Q8TAA1 199 aaKnown RBP1.91□□□□□ -2.1
CLN5-212ENST00000636602 DCANP1Q8TF63 244 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 TIMM21Q9BVV7 248 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 Q9Y3F1 56 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 SAMHD1Q9Y3Z3 626 aaKnown RBP1.91□□□□□ -2.1
CLN5-212ENST00000636602 ALPK3Q96L96 1907 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 SIP14410 1827 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 CACNA1GO43497 2377 aa1.91□□□□□ -2.1
CLN5-212ENST00000636602 hCG_1818297A0A087WSY0 165 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 A8MT66 165 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 SERPINE1P05121 402 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 CST2P09228 141 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 NFYAP23511 347 aaPredicted RBP1.9□□□□□ -2.11
CLN5-212ENST00000636602 ARF6P62330 175 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 RELAQ04206 551 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 KISS1Q15726 138 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 TPRXLQ17RH7 258 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 C12orf74Q32Q52 190 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 SPANXN3Q5MJ09 141 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 HACD4Q5VWC8 232 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 OR52L1Q8NGH7 329 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 OR10X1Q8NGY0 326 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 PPTC7Q8NI37 304 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 DNAJC9Q8WXX5 260 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 H1FXQ92522 213 aaKnown RBP1.9□□□□□ -2.11
CLN5-212ENST00000636602 ENY2Q9NPA8 101 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 MKI67P46013 3256 aaKnown RBP1.9□□□□□ -2.11
CLN5-212ENST00000636602 CUL9Q8IWT3 2517 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 PCNX2A6NKB5 2137 aa1.9□□□□□ -2.11
CLN5-212ENST00000636602 TNRC18O15417 2968 aaPredicted RBP1.89□□□□□ -2.11
CLN5-212ENST00000636602 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 COL4A2P08572 1712 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 A0A0D9SEW6 157 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
CLN5-212ENST00000636602 TRGC1P0CF51 173 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 SMIM10L2AP0DMW4 78 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 SMIM10L2BP0DMW5 78 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 AQP4P55087 323 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 SUPT4H1P63272 117 aaKnown RBP1.89□□□□□ -2.11
CLN5-212ENST00000636602 MOGQ16653 247 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 TMEM86AQ8N2M4 240 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 LINC00301Q8NCQ3 95 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 Q8NDZ9 215 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 RASSF5Q8WWW0 418 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 C9orf16Q9BUW7 83 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 C20orf27Q9GZN8 174 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 OPTCQ9UBM4 332 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 ARL5AQ9Y689 179 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 BAHCC1Q9P281 2608 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 MICAL3Q7RTP6 2002 aa1.89□□□□□ -2.11
CLN5-212ENST00000636602 KIAA2026Q5HYC2 2103 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 PDCD11Q14690 1871 aaKnown RBP1.88□□□□□ -2.11
CLN5-212ENST00000636602 GBF1Q92538 1859 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 CITO14578 2027 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 PTPRSQ13332 1948 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 FAM159BA6NKW6 160 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 TRAPPC2LH3BP13 241 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 OR2B3O76000 313 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 S1PR2O95136 353 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 ZNF682O95780 498 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 C8GP07360 202 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 SMIM17P0DL12 118 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 MAGEA12P43365 314 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 TMEM155Q4W5P6 130 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 TEX36Q5VZQ5 186 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 TMEM42Q69YG0 159 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 FAM173BQ6P4H8 233 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 SLC36A1Q7Z2H8 476 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 CLVS1Q8IUQ0 354 aaPredicted RBP1.88□□□□□ -2.11
CLN5-212ENST00000636602 SCGB3A1Q96QR1 104 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 LXNQ9BS40 222 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 CYSLTR1Q9Y271 337 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 ANK1P16157 1881 aa1.88□□□□□ -2.11
CLN5-212ENST00000636602 COL4A6Q14031 1691 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 ORC5O43913 435 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 IFI30P13284 250 aa1.87□□□□□ -2.11
CLN5-212ENST00000636602 PPIBP23284 216 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms