RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	PSG9	Q00887	426 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	ATOH7	Q8N100	152 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	WFDC11	Q8NEX6	87 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997		A0A1B0GWJ7	208 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SRI	P30626	198 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	COX19	Q49B96	90 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SNHG12	Q9BXW3	62 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TMEM250	H0YL14	139 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	NMS	Q5H8A3	153 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	CYYR1	Q96J86	154 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PRDM13	Q9H4Q3	707 aa		11.66	□□□□□ -0.54
NEDD4L-238	ENST00000635997	BUB1B-PAK6	H3BSN5	160 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	GZMB	P10144	247 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PPIF	P30405	207 aa	Known RBP	11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RPL15	P61313	204 aa	Known RBP	11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SLC25A48	Q6ZT89	311 aa	Known RBP	11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	FAM169B	Q8N8A8	192 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	IGFBPL1	Q8WX77	278 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	WDR83OS	Q9Y284	106 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PLXNB1	O43157	2135 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RAB9A	P51151	201 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	RPL24	P83731	157 aa	Known RBP	11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PRR31	Q5SQ13	230 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	TREML4	Q6UXN2	200 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SCGB1D4	Q6XE38	83 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	SFRP2	Q96HF1	295 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	MRPL18	Q9H0U6	180 aa	Known RBP	11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	ACAN	P16112	2415 aa		11.65	□□□□□ -0.54
NEDD4L-238	ENST00000635997	PEX7	O00628	323 aa		11.65	□□□□□ -0.55
NEDD4L-238	ENST00000635997	NPFF	O15130	113 aa		11.65	□□□□□ -0.55
NEDD4L-238	ENST00000635997		Q9H3A6	140 aa		11.65	□□□□□ -0.55
NEDD4L-238	ENST00000635997		H0YJW9	148 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997		J3QLI3	93 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TMEM155	Q4W5P6	130 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TRAV41	A0A0B4J266	112 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	FAM181B	A6NEQ2	426 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	NDP	Q00604	133 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	EFNB3	Q15768	340 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ZNF506	Q5JVG8	444 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SPATA31B1P	Q5VZV4	182 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	BEND2	Q8NDZ0	799 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IMMP2L	Q96T52	175 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	C5orf64	Q2M2E5	130 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ZNF585B	Q52M93	769 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	LRTM2	Q8N967	370 aa		11.64	□□□□□ -0.55
NEDD4L-238	ENST00000635997	PSG1	P11464	419 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ZNF502	Q8TBZ5	544 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TNFRSF14	Q92956	283 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TMEM191A	Q9H0A3	160 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	RNASE7	Q9H1E1	156 aa	Known RBP	11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	HTN3	P15516	51 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	FOXL1	Q12952	345 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997		A0A087WWC5	75 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ASCL4	Q6XD76	172 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IGLV3-9	A0A075B6K5	115 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	PMS2P5	A8MQ11	134 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IGHV4-39	P01824	125 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	ZNF56	Q15929	161 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	C10orf91	Q5T1B1	145 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MYOZ3	Q8TDC0	251 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MAP1LC3C	Q9BXW4	147 aa		11.63	□□□□□ -0.55
NEDD4L-238	ENST00000635997	PSMB11	A5LHX3	300 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	PRTN3	P24158	256 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	CNTFR	P26992	372 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SEPSECS	Q9HD40	501 aa	Known RBP	11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	UQCR10	Q9UDW1	63 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SIGLEC9	Q9Y336	463 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	FBLN7	Q53RD9	439 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IGFL4	Q6B9Z1	124 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	RPP25L	Q8N5L8	163 aa	Known RBP	11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IGHV4-61	A0A0C4DH41	118 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	INAFM1	C9JVW0	142 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	GGTLC1	Q9BX51	225 aa		11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MBNL3	Q9NUK0	354 aa	Known RBP	11.62	□□□□□ -0.55
NEDD4L-238	ENST00000635997	IGLV1-44	P01699	117 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	C3orf36	Q3SXR2	165 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MIEN1	Q9BRT3	115 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MOB4	Q9Y3A3	225 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	CA1	P00915	261 aa	Predicted RBP	11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SPRN	Q5BIV9	151 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SCRT1	Q9BWW7	348 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	SCGB1C2	P0DMR2	95 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	PAX8	Q06710	450 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	DIAPH2-AS1	Q14236	149 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	FAM71F2	Q6NXP2	309 aa		11.61	□□□□□ -0.55
NEDD4L-238	ENST00000635997	HLA-DQA1	P01909	254 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TSPO	P30536	169 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	EXOC3-AS1	Q8N2X6	119 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	MED12L	Q86YW9	2145 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	LOX	P28300	417 aa	Predicted RBP	11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TRBV20OR9-2	A0A075B6H5	130 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	LINC00614	P0C842	121 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	RNASE4	P34096	147 aa	Known RBP	11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	GPR82	Q96P67	336 aa		11.6	□□□□□ -0.55
NEDD4L-238	ENST00000635997	NMU	P48645	174 aa		11.59	□□□□□ -0.55
NEDD4L-238	ENST00000635997	C19orf35	Q6ZS72	473 aa		11.59	□□□□□ -0.55
NEDD4L-238	ENST00000635997	TMEM167A	Q8TBQ9	72 aa		11.59	□□□□□ -0.55
NEDD4L-238	ENST00000635997	KIAA1549L	Q6ZVL6	1849 aa		11.59	□□□□□ -0.55
NEDD4L-238	ENST00000635997	FBLL1	A6NHQ2	334 aa	Known RBP	11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 157 ms