RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ARPC5LQ9BPX5 153 aa7.28□□□□□ -1.24
LINC00339-210ENST00000635675 GGACTQ9BVM4 153 aa7.28□□□□□ -1.24
LINC00339-210ENST00000635675 ZNF471Q9BX82 626 aaPredicted RBP7.28□□□□□ -1.24
LINC00339-210ENST00000635675 LYRM2Q9NU23 88 aaPredicted RBP7.28□□□□□ -1.24
LINC00339-210ENST00000635675 C19orf73Q9NVV2 129 aa7.28□□□□□ -1.24
LINC00339-210ENST00000635675 A0A0D9SG52 128 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 DFFBO76075 338 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 FRMD6-AS1P0C7T7 363 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 IGHV4-30-4P0DP06 118 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 TMEM182Q6ZP80 229 aaPredicted RBP7.27□□□□□ -1.24
LINC00339-210ENST00000635675 TCF24Q7RTU0 167 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 TMEM252Q8N6L7 170 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 AQP10Q96PS8 301 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 SLC25A31Q9H0C2 315 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 TMEM231Q9H6L2 316 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 NPVFQ9HCQ7 196 aa7.27□□□□□ -1.24
LINC00339-210ENST00000635675 SMCO3A2RU48 225 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 OR11H12B2RN74 326 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 BUB3O43684 328 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
LINC00339-210ENST00000635675 C4BPBP20851 252 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 SULT1A1P50225 295 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 IFITM2Q01629 132 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 ZNF345Q14585 488 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 C16orf54Q6UWD8 224 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 STX12Q86Y82 276 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 STPG3Q8N7X2 389 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 GRAMD2BQ96HH9 432 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 NARS2Q96I59 477 aaKnown RBP7.27□□□□□ -1.25
LINC00339-210ENST00000635675 WFDC1Q9HC57 220 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
LINC00339-210ENST00000635675 OR4C46A6NHA9 309 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
LINC00339-210ENST00000635675 LYZP61626 148 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 SLC38A11Q08AI6 406 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 RPL7L1Q6DKI1 246 aaKnown RBP7.26□□□□□ -1.25
LINC00339-210ENST00000635675 TEPPQ6URK8 271 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
LINC00339-210ENST00000635675 CYP2G1PQ6ZSU1 146 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 SBSPONQ8IVN8 264 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 GBGT1Q8N5D6 347 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 DEFB125Q8N687 156 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 PCNPQ8WW12 178 aaKnown RBP7.26□□□□□ -1.25
LINC00339-210ENST00000635675 GLMPQ8WWB7 406 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 FAM110AQ9BQ89 295 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 PBDC1Q9BVG4 233 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 WFDC10AQ9H1F0 79 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 MS4A6AQ9H2W1 248 aa7.26□□□□□ -1.25
LINC00339-210ENST00000635675 COL7A1Q02388 2944 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 UBE2L5PA0A1B0GUS4 154 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 HELTA6NFD8 242 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 NHLRC4P0CG21 123 aaPredicted RBP7.25□□□□□ -1.25
LINC00339-210ENST00000635675 SELENOTP62341 195 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 RPL11P62913 178 aaKnown RBP7.25□□□□□ -1.25
LINC00339-210ENST00000635675 PAFAH1B2P68402 229 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 HBG1P69891 147 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 HBG2P69892 147 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 ODF3L2Q3SX64 289 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 ALKAL2Q6UX46 152 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 BPIFCQ8NFQ6 507 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 TUBA4BQ9H853 241 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 PFDN2Q9UHV9 154 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 SLC45A2Q9UMX9 530 aa7.25□□□□□ -1.25
LINC00339-210ENST00000635675 RBMY1BA6NDE4 496 aaKnown RBP7.24□□□□□ -1.25
LINC00339-210ENST00000635675 RBMY1EA6NEQ0 496 aaKnown RBP7.24□□□□□ -1.25
LINC00339-210ENST00000635675 AGPAT2O15120 278 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 RBMY1DP0C7P1 496 aaKnown RBP7.24□□□□□ -1.25
LINC00339-210ENST00000635675 TFPI2P48307 235 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 PLP1P60201 277 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 ATP6V1FQ16864 119 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 C1orf194Q5T5A4 169 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 SLC51BQ86UW2 128 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 HSD17B11Q8NBQ5 300 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 DCANP1Q8TF63 244 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 CITED4Q96RK1 184 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 MGST2Q99735 147 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 ASCL2Q99929 193 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 TMEM147Q9BVK8 224 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 SRD5A3Q9H8P0 318 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 UQCC1Q9NVA1 299 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 UBQLN2Q9UHD9 624 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 RFNGQ9Y644 331 aa7.24□□□□□ -1.25
LINC00339-210ENST00000635675 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 K7EQG2 157 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 DNASE2O00115 360 aaPredicted RBP7.23□□□□□ -1.25
LINC00339-210ENST00000635675 TPT1P13693 172 aaKnown RBP7.23□□□□□ -1.25
LINC00339-210ENST00000635675 ORM2P19652 201 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
LINC00339-210ENST00000635675 BAXQ07812 192 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 HAGHQ16775 308 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 FAM74A1Q5RGS3 127 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 SIGLEC15Q6ZMC9 328 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
LINC00339-210ENST00000635675 STXBP6Q8NFX7 210 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms