RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 C15orf62A8K5M9 175 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 CA1P00915 261 aaPredicted RBP17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 EVI2AP22794 236 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 PAX2Q02962 417 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 PDE6HQ13956 83 aa17.18■□□□□ 0.34
SMARCA2-227ENST00000634760 C10orf55Q5SWW7 151 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 NHP2Q9NX24 153 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 NPIPB5A8MRT5 1133 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 RCHY1Q96PM5 261 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 SELLP14151 372 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 ZNF329Q86UD4 541 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 RNASE2P10153 161 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 NTF4P34130 210 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
SMARCA2-227ENST00000634760 LYZL1Q6UWQ5 148 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 KLRD1Q13241 179 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 PGPEP1Q9NXJ5 209 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 LY6DQ14210 128 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 AMBPP02760 352 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 TMEM86BQ8N661 226 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 RPL15P61313 204 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 GLRX5Q86SX6 157 aa17.16■□□□□ 0.34
SMARCA2-227ENST00000634760 EXOC3-AS1Q8N2X6 119 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 D6R8Y8 96 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 C5orf63A6NC05 138 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 GATA3P23771 443 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 HGFACQ04756 655 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 VCYO14598 125 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 KLHDC3Q9BQ90 382 aa17.15■□□□□ 0.34
SMARCA2-227ENST00000634760 SCN2AQ99250 2005 aa17.14■□□□□ 0.34
SMARCA2-227ENST00000634760 LILRA1O75019 489 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 HTN3P15516 51 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 LINC01356Q8N9X3 169 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 RFNGQ9Y644 331 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 LMO1P25800 156 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 KNL1Q8NG31 2342 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 GATA4P43694 442 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 NUP35Q8NFH5 326 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 PPIFP30405 207 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 LCN12Q6JVE5 192 aa17.14■□□□□ 0.33
SMARCA2-227ENST00000634760 TRAV2A0A0B4J234 112 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 GZMBP10144 247 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 SHANK2-AS3Q9BTD1 123 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 PRTN3P24158 256 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 TMEM75Q8N9X5 138 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 RLFQ13129 1914 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 PCP4P48539 62 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 C1orf194Q5T5A4 169 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 DERL1Q9BUN8 251 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 ZNF492Q9P255 531 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 TMEM8BA6NDV4 472 aa17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-227ENST00000634760 C1QTNF4Q9BXJ3 329 aa17.12■□□□□ 0.33
SMARCA2-227ENST00000634760 LINC00469Q8N7U9 141 aa17.12■□□□□ 0.33
SMARCA2-227ENST00000634760 RPL36AP83881 106 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-227ENST00000634760 RASL10AQ92737 203 aa17.12■□□□□ 0.33
SMARCA2-227ENST00000634760 RPL36ALQ969Q0 106 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-227ENST00000634760 RNF166Q96A37 237 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 NDUFB8O95169 186 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 ATXN8Q156A1 80 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 Q86TA4 180 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 TRAV8-4A0A0B4J246 113 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 INSP01308 110 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 NSUN5P1Q3KNT7 163 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 IGHV4-39P01824 125 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 GNLYP22749 145 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 OVOL2Q9BRP0 275 aa17.11■□□□□ 0.33
SMARCA2-227ENST00000634760 TRAV8-2A0A0B4J237 113 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 H3BUX3 64 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 SAP30O75446 220 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 CHCHD5Q9BSY4 110 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 M0R2P5 195 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 VGLL1Q99990 258 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 FAM110DQ8TAY7 271 aaPredicted RBP17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 ERG28Q9UKR5 140 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 TSC2P49815 1807 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 TEX43Q6ZNM6 134 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 ZNF479Q96JC4 524 aa17.1■□□□□ 0.33
SMARCA2-227ENST00000634760 A8MWV9 139 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 SAMD5Q5TGI4 173 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 IGFL3Q6UXB1 125 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 FNDC4Q9H6D8 234 aaPredicted RBP17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 TMEM219Q86XT9 240 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 FAM231BA6NCW3 169 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 ZNF833PQ6ZTB9 187 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 MSRB2Q9Y3D2 182 aa17.09■□□□□ 0.33
SMARCA2-227ENST00000634760 GFI1BQ5VTD9 330 aa17.08■□□□□ 0.33
SMARCA2-227ENST00000634760 CNTRLQ7Z7A1 2325 aa17.08■□□□□ 0.33
SMARCA2-227ENST00000634760 COL8A2P25067 703 aa17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 YPEL3P61236 119 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 RNF144BQ7Z419 303 aa17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 CD33P20138 364 aa17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 PHLDA1Q8WV24 401 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 VWA8A3KMH1 1905 aa17.08■□□□□ 0.32
SMARCA2-227ENST00000634760 UBE2E1P51965 193 aa17.07■□□□□ 0.32
SMARCA2-227ENST00000634760 CT83Q5H943 113 aa17.07■□□□□ 0.32
SMARCA2-227ENST00000634760 ARTNQ5T4W7 220 aa17.07■□□□□ 0.32
SMARCA2-227ENST00000634760 UNQ6494/PRO21346Q6UXR6 183 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms