RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 A0A0B4J2A0 478 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 ANKRD20A5PA0PJZ0 165 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 H3BMM0 161 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 IGKV3-20P01619 116 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 AMBPP02760 352 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 HLA-DRB4P13762 266 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 ID1P41134 155 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 NKX2-1P43699 371 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-223ENST00000631247 LYZP61626 148 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 OR8G2PQ6IF36 304 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 CSNK1G2-AS1Q8NCQ2 148 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 RAB2BQ8WUD1 216 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 NDUFAF3Q9BU61 184 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 RBKSQ9H477 322 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 CCDC59Q9P031 241 aaKnown RBP7.48□□□□□ -1.21
UBE3A-223ENST00000631247 HSPB7Q9UBY9 170 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 SHPKQ9UHJ6 478 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 PAIP2BQ9ULR5 123 aaKnown RBP7.48□□□□□ -1.21
UBE3A-223ENST00000631247 CELA1Q9UNI1 258 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 HLA-DRB4X5D2U9 266 aa7.48□□□□□ -1.21
UBE3A-223ENST00000631247 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
UBE3A-223ENST00000631247 FAUP35544 74 aaKnown RBP7.47□□□□□ -1.21
UBE3A-223ENST00000631247 EMP1P54849 157 aa7.47□□□□□ -1.21
UBE3A-223ENST00000631247 LYZL2Q7Z4W2 148 aa7.47□□□□□ -1.21
UBE3A-223ENST00000631247 TMED4Q7Z7H5 227 aa7.47□□□□□ -1.21
UBE3A-223ENST00000631247 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
UBE3A-223ENST00000631247 PKD1P98161 4303 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 TMEM189A5PLL7 270 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 P0DMU3 169 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 FAM231AP0DMU4 169 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 FAM231CP0DMU5 169 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 GPX4P36969 197 aaPredicted RBP7.46□□□□□ -1.22
UBE3A-223ENST00000631247 PSMB3P49720 205 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 ATP5IP56385 69 aaPredicted RBP7.46□□□□□ -1.22
UBE3A-223ENST00000631247 RAB11AP62491 216 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 SUPT4H1P63272 117 aaKnown RBP7.46□□□□□ -1.22
UBE3A-223ENST00000631247 ZNF90Q03938 601 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 C12orf74Q32Q52 190 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
UBE3A-223ENST00000631247 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 DUXBA0A1W2PPF3 345 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 FABP12A6NFH5 140 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 SNRPGP15A8MWD9 76 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 IAPPP10997 89 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 ALDH3B2P48448 385 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 FXYD7P58549 80 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 AP3S2P59780 193 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 OR2F1Q13607 317 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 GAMTQ14353 236 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 C1orf194Q5T5A4 169 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 FOXI2Q6ZQN5 318 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 OR8I2Q8N0Y5 310 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 DYNC2LI1Q8TCX1 351 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 BCL7BQ9BQE9 202 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 C7orf50Q9BRJ6 194 aaKnown RBP7.45□□□□□ -1.22
UBE3A-223ENST00000631247 SAV1Q9H4B6 383 aaPredicted RBP7.45□□□□□ -1.22
UBE3A-223ENST00000631247 GOLT1BQ9Y3E0 138 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
UBE3A-223ENST00000631247 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
UBE3A-223ENST00000631247 SMIM9A6NGZ8 99 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 MED6O75586 246 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 MEOX2P50222 304 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 TMBIM6P55061 237 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 DEFB1P60022 68 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 RPP30P78346 268 aaKnown RBP7.44□□□□□ -1.22
UBE3A-223ENST00000631247 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 GDF5OSQ5U4N7 250 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 SPATA31B1PQ5VZV4 182 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 ZNF705AQ6ZN79 300 aaPredicted RBP7.44□□□□□ -1.22
UBE3A-223ENST00000631247 NEU1Q99519 415 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
UBE3A-223ENST00000631247 RYR1P21817 5038 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
UBE3A-223ENST00000631247 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-223ENST00000631247 ISLRO14498 428 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-223ENST00000631247 IFNA21P01568 189 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 HBE1P02100 147 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-223ENST00000631247 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-223ENST00000631247 HTN3P15516 51 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 S100A7P31151 101 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 GALR1P47211 349 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 PSG9Q00887 426 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 PYDC2Q56P42 97 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 POM121L12Q8N7R1 296 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 MCFD2Q8NI22 146 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 C16orf92Q96LL3 132 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 CIB3Q96Q77 187 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-223ENST00000631247 TRGV9Q99603 122 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 TMEM208Q9BTX3 173 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 SLC25A22Q9H936 323 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 RPRMQ9NS64 109 aa7.43□□□□□ -1.22
UBE3A-223ENST00000631247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms